WormBase Tree Display for Gene: WBGene00020166
expand all nodes | collapse all nodes | view schema
| WBGene00020166 | SMap | S_parent | Sequence | T02G5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T02G5.7 | |||||||
| Molecular_name | T02G5.7 | ||||||||
| T02G5.7.1 | |||||||||
| CE04859 | |||||||||
| Other_name | CELE_T02G5.7 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | T02G5.7 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (26) | |||||||||
| Strain | WBStrain00033241 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00074202 | ||||||||
| 00074203 | |||||||||
| 00074204 | |||||||||
| 00074205 | |||||||||
| 00074206 | |||||||||
| 00124868 | |||||||||
| 00124869 | |||||||||
| Contained_in_operon | CEOP2284 | ||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00002183 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00009952 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00015125 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00013284 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | The T02G5.7 gene encodes a homolog of the human gene ACAT1, which when mutated leads to alpha-methylacetoaceticaciduria (OMIM:203750). | Paper_evidence | WBPaper00004637 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable acetyl-CoA C-acetyltransferase activity. Predicted to be involved in fatty acid beta-oxidation. Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in arteriosclerosis; beta-ketothiolase deficiency; and carbohydrate metabolic disorder. Is an ortholog of human ACAT1 (acetyl-CoA acetyltransferase 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:14723 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:93) | ||||
| DOID:2978 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:93) | ||||||
| DOID:2349 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:93) | ||||||
| Molecular_info | Corresponding_CDS | T02G5.7 | |||||||
| Corresponding_transcript | T02G5.7.1 | ||||||||
| Other_sequence (57) | |||||||||
| Associated_feature | WBsf221554 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00009100 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052230 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00102658 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035070 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011239 | ||||||||
| Expr1038769 | |||||||||
| Expr1155862 | |||||||||
| Expr2005753 | |||||||||
| Expr2023967 | |||||||||
| Drives_construct | WBCnstr00025330 | ||||||||
| Construct_product | WBCnstr00025330 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (153) | |||||||||
| Interaction (61) | |||||||||
| Map_info | Positive | Positive_clone | T02G5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 0.492851 | |||||||
| Reference | WBPaper00026800 | ||||||||
| WBPaper00028360 | |||||||||
| WBPaper00029292 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
