WormBase Tree Display for Gene: WBGene00019645
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WBGene00019645 | SMap | S_parent | Sequence | K11D12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | swt-7 | Paper_evidence | WBPaper00037817 | |||||
Person_evidence | WBPerson12258 | ||||||||
Sequence_name | K11D12.5 | ||||||||
Molecular_name | K11D12.5 | ||||||||
K11D12.5.1 | |||||||||
CE12134 | |||||||||
Other_name | CELE_K11D12.5 | Accession_evidence | NDB | BX284605 | |||||
Public_name | swt-7 | ||||||||
DB_info | Database | AceView | gene | 5F508 | |||||
WormQTL | gene | WBGene00019645 | |||||||
WormFlux | gene | WBGene00019645 | |||||||
NDB | locus_tag | CELE_K11D12.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00019645|UniProtKB=O44620 | |||||||
family | PTHR10791 | ||||||||
NCBI | gene | 178890 | |||||||
RefSeq | protein | NM_071948.4 | |||||||
TREEFAM | TREEFAM_ID | TF313635 | |||||||
TrEMBL | UniProtAcc | O44620 | |||||||
UniProt_GCRP | UniProtAcc | O44620 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 14 Dec 2010 10:49:16 | WBPerson2970 | Name_change | CGC_name | swt-7 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | swt | ||||||||
Allele (32) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (13) | |||||||||
Ortholog (45) | |||||||||
Paralog | WBGene00002295 | Caenorhabditis elegans | From_analysis | Panther | |||||
WBGene00007384 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00010594 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WBGene00011190 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00012647 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00016922 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00019300 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Concise_description | swt-7 encodes a transmembrane protein that is a member of the SWEET1 family of sugar transporters. | Curator_confirmed | WBPerson1843 | |||||
Date_last_updated | 03 Jun 2014 00:00:00 | ||||||||
Automated_description | Predicted to enable sugar transmembrane transporter activity. Involved in defense response to Gram-negative bacterium and innate immune response. Predicted to be located in Golgi membrane. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | K11D12.5 | |||||||
Corresponding_transcript | K11D12.5.1 | ||||||||
Other_sequence (62) | |||||||||
Associated_feature | WBsf233632 | ||||||||
Experimental_info | RNAi_result (4) | ||||||||
Expr_pattern | Expr1023688 | ||||||||
Expr1038483 | |||||||||
Expr1154297 | |||||||||
Expr2017169 | |||||||||
Expr2035305 | |||||||||
Drives_construct | WBCnstr00025705 | ||||||||
Construct_product | WBCnstr00025705 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (159) | |||||||||
Interaction | WBInteraction000188156 | ||||||||
WBInteraction000315247 | |||||||||
WBInteraction000359514 | |||||||||
WBInteraction000376566 | |||||||||
WBInteraction000406393 | |||||||||
WBInteraction000542656 | |||||||||
Map_info | Map | V | Position | -3.5787 | Error | 0.002491 | |||
Positive | Positive_clone | K11D12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00028482 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |