WormBase Tree Display for Gene: WBGene00019588
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| WBGene00019588 | SMap | S_parent | Sequence | K09F6 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | Sequence_name | K09F6.5 | ||||||||
| Molecular_name | K09F6.5 | |||||||||
| Other_name | CELE_K09F6.5 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | K09F6.5 | |||||||||
| DB_info | Database | AceView | gene | 2C560 | ||||||
| WormQTL | gene | WBGene00019588 | ||||||||
| WormFlux | gene | WBGene00019588 | ||||||||
| NDB | locus_tag | CELE_K09F6.5 | ||||||||
| NCBI | gene | 187233 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 21 Nov 2019 15:07:39 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| 3 | 21 Nov 2019 15:07:52 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (80) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00149134 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| TreeFam | ||||||||||
| Inparanoid_8 | ||||||||||
| WBGene00139695 | Caenorhabditis brenneri | From_analysis | OMA | |||||||
| TreeFam | ||||||||||
| WBGene00075451 | Caenorhabditis remanei | From_analysis | OMA | |||||||
| TreeFam | ||||||||||
| WBGene00072408 | Caenorhabditis remanei | From_analysis | OMA | |||||||
| TreeFam | ||||||||||
| WBGene00193057 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00145727 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| Paralog | WBGene00004392 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00013316 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00017610 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Panther | ||||||||||
| WBGene00018842 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| Panther | ||||||||||
| Structured_description | Automated_description | Enriched in anal sphincter muscle based on single-cell RNA-seq studies. Is affected by several genes including eat-2; sir-2.1; and pgl-1 based on RNA-seq and microarray studies. Is affected by twelve chemicals including hydrogen sulfide; metformin; and Sirolimus based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | K09F6.5:wp274 | ||||||||
| Corresponding_pseudogene | K09F6.5 | |||||||||
| Other_sequence | CR11320 | |||||||||
| CRC03489_1 | ||||||||||
| Associated_feature | WBsf986918 | |||||||||
| WBsf1011697 | ||||||||||
| Experimental_info | Expr_pattern | Expr1154155 | ||||||||
| Expr2004991 | ||||||||||
| Expr2023212 | ||||||||||
| Microarray_results (15) | ||||||||||
| Expression_cluster (66) | ||||||||||
| Map_info | Positive | Positive_clone | K09F6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | II | -13.8364 | ||||||||
| Method | Gene |
