WormBase Tree Display for Gene: WBGene00019178
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| WBGene00019178 | SMap | S_parent | Sequence | H10D18 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | scl-12 | Person_evidence | WBPerson261 | |||||
| Sequence_name | H10D18.2 | ||||||||
| Molecular_name | H10D18.2 | ||||||||
| H10D18.2.1 | |||||||||
| CE23800 | |||||||||
| Other_name | CELE_H10D18.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | scl-12 | ||||||||
| DB_info | Database | AceView | gene | 5E293 | |||||
| WormQTL | gene | WBGene00019178 | |||||||
| WormFlux | gene | WBGene00019178 | |||||||
| NDB | locus_tag | CELE_H10D18.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019178|UniProtKB=Q9N5N3 | |||||||
| family | PTHR10334 | ||||||||
| NCBI | gene | 186714 | |||||||
| RefSeq | protein | NM_071655.3 | |||||||
| TREEFAM | TREEFAM_ID | TF352352 | |||||||
| TrEMBL | UniProtAcc | Q9N5N3 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N5N3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 07 Nov 2007 11:51:23 | WBPerson2970 | Name_change | CGC_name | scl-12 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | scl | ||||||||
| Allele (25) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00095562 | ||||||||
| Ortholog (125) | |||||||||
| Paralog (33) | |||||||||
| Structured_description | Concise_description | scl-12 encodes a predicted extracellular protein that is a member of the C. elegans family of SCP/TAPS domain-containing proteins. | Curator_confirmed | WBPerson1843 | |||||
| Date_last_updated | 26 Mar 2008 00:00:00 | ||||||||
| Automated_description | Predicted to be located in extracellular space. Is an ortholog of human PI15 (peptidase inhibitor 15). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | H10D18.2 | |||||||
| Corresponding_transcript | H10D18.2.1 | ||||||||
| Other_sequence (28) | |||||||||
| Associated_feature | WBsf231611 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00049349 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00016227 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033687 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016228 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020249 | ||||||||
| Expr1153081 | |||||||||
| Expr2015627 | |||||||||
| Expr2033861 | |||||||||
| Drives_construct | WBCnstr00026010 | ||||||||
| Construct_product | WBCnstr00026010 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (99) | |||||||||
| Interaction | WBInteraction000122983 | ||||||||
| WBInteraction000123854 | |||||||||
| WBInteraction000278193 | |||||||||
| WBInteraction000278194 | |||||||||
| WBInteraction000300982 | |||||||||
| WBInteraction000359267 | |||||||||
| WBInteraction000363397 | |||||||||
| WBInteraction000555335 | |||||||||
| WBInteraction000568325 | |||||||||
| Map_info | Map | V | Position | -7.98243 | Error | 0.001149 | |||
| Positive | Positive_clone | H10D18 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
