WormBase Tree Display for Gene: WBGene00019158
expand all nodes | collapse all nodes | view schema
| WBGene00019158 | SMap | S_parent | Sequence | H05C05 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | H05C05.2 | |||||||
| Molecular_name | H05C05.2a | ||||||||
| H05C05.2a.1 | |||||||||
| CE32452 | |||||||||
| H05C05.2b | |||||||||
| CE32453 | |||||||||
| H05C05.2b.1 | |||||||||
| Other_name | CELE_H05C05.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | H05C05.2 | ||||||||
| DB_info | Database | AceView | gene | 3E52 | |||||
| WormQTL | gene | WBGene00019158 | |||||||
| WormFlux | gene | WBGene00019158 | |||||||
| NDB | locus_tag | CELE_H05C05.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019158|UniProtKB=H2L0A7 | |||||||
| family | PTHR23362 | ||||||||
| NCBI | gene | 175407 | |||||||
| RefSeq | protein | NM_001393301.1 | |||||||
| NM_065243.7 | |||||||||
| TREEFAM | TREEFAM_ID | TF336090 | |||||||
| TrEMBL | UniProtAcc | Q8ITW5 | |||||||
| H2L0A7 | |||||||||
| UniProt_GCRP | UniProtAcc | H2L0A7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (101) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Paralog (36) | |||||||||
| Structured_description | Automated_description | Enriched in body wall muscle cell; coelomocyte; germ line; neurons; and somatic gonad precursor based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including hsf-1; sir-2.1; and clk-1 based on microarray and RNA-seq studies. Is affected by four chemicals including Zidovudine; paraquat; and Hydrolyzable Tannins based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | H05C05.2a | |||||||
| H05C05.2b | |||||||||
| Corresponding_CDS_history | H05C05.2:wp88 | ||||||||
| Corresponding_transcript | H05C05.2a.1 | ||||||||
| H05C05.2b.1 | |||||||||
| Associated_feature | WBsf991638 | ||||||||
| WBsf1014492 | |||||||||
| WBsf226313 | |||||||||
| WBsf226314 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00016196 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00049300 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006529 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014517 | ||||||||
| Expr1038272 | |||||||||
| Expr1153044 | |||||||||
| Expr2004522 | |||||||||
| Expr2022747 | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (103) | |||||||||
| Interaction (22) | |||||||||
| Map_info | Positive | Positive_clone | H05C05 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -8.32356 | |||||||
| Method | Gene |
