WormBase Tree Display for Gene: WBGene00019150
expand all nodes | collapse all nodes | view schema
| WBGene00019150 | SMap | S_parent | Sequence | H14E04 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | H04J21.1 | |||||||
| Molecular_name | H04J21.1 | ||||||||
| H04J21.1.1 | |||||||||
| CE54119 | |||||||||
| Other_name | CELE_H04J21.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | H04J21.1 | ||||||||
| DB_info | Database | AceView | gene | 3D458 | |||||
| 3D456 | |||||||||
| WormQTL | gene | WBGene00019150 | |||||||
| WormFlux | gene | WBGene00019150 | |||||||
| NDB | locus_tag | CELE_H04J21.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019150|UniProtKB=O61207 | |||||||
| family | PTHR32525 | ||||||||
| NCBI | gene | 186681 | |||||||
| RefSeq | protein | NM_001381772.1 | |||||||
| TREEFAM | TREEFAM_ID | TF322766 | |||||||
| TrEMBL | UniProtAcc | O61207 | |||||||
| UniProt_GCRP | UniProtAcc | O61207 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 21 Jan 2020 15:18:46 | WBPerson4025 | Event | Split_into | WBGene00305994 | ||||
| Split_into | WBGene00305994 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (80) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00037098 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| WBGene00037099 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00061411 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| WBGene00067933 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| WBGene00084392 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| chrIII_pilon.g7092 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (31) | |||||||||
| Structured_description | Automated_description | Enriched in amphid neurons and in male based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and eat-2 based on microarray and RNA-seq studies. Is affected by six chemicals including tryptophan; manganese chloride; and multi-walled carbon nanotube based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Domain of unknown function WSN and Domain of unknown function. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | H04J21.1 | |||||||
| Corresponding_CDS_history | H04J21.1:wp275 | ||||||||
| Corresponding_transcript | H04J21.1.1 | ||||||||
| Associated_feature | WBsf650874 | ||||||||
| WBsf666594 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00006566 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00049282 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016181 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022887 | ||||||||
| Expr1153028 | |||||||||
| Expr2004517 | |||||||||
| Expr2022742 | |||||||||
| Microarray_results | SMD_H04J21.1 | ||||||||
| Aff_H14E04.D | |||||||||
| GPL8673_H04J21_1P01793 | |||||||||
| Expression_cluster (111) | |||||||||
| Interaction | WBInteraction000146517 | ||||||||
| WBInteraction000283922 | |||||||||
| WBInteraction000319366 | |||||||||
| WBInteraction000359218 | |||||||||
| WBInteraction000360569 | |||||||||
| WBInteraction000436347 | |||||||||
| Map_info | Positive | Positive_clone | H04J21 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -14.6815 | |||||||
| Method | Gene |
