WormBase Tree Display for Gene: WBGene00019002
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| WBGene00019002 | SMap | S_parent | Sequence | F57B10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | syp-6 | Person_evidence | WBPerson26497 | |||||
| Sequence_name | F57B10.4 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_F57B10.4 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | syp-6 | ||||||||
| DB_info | Database | AceView | gene | 1H143 | |||||
| WormQTL | gene | WBGene00019002 | |||||||
| WormFlux | gene | WBGene00019002 | |||||||
| NDB | locus_tag | CELE_F57B10.4 | |||||||
| NCBI | gene | 172375 | |||||||
| RefSeq | protein | NM_001392463.1 | |||||||
| NM_059494.6 | |||||||||
| NM_001392461.1 | |||||||||
| NM_001392460.1 | |||||||||
| TrEMBL | UniProtAcc | A0A7R9SUL5 | |||||||
| A0A7R9SUX0 | |||||||||
| A0A7R9SUK8 | |||||||||
| O44741 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A7R9SUX0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 20 May 2019 14:10:26 | WBPerson1983 | Name_change | CGC_name | syp-6 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | syp | ||||||||
| Allele (35) | |||||||||
| Possibly_affected_by | WBVar02153164 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP1991 | ||||||||
| Ortholog (19) | |||||||||
| Paralog | WBGene00021832 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in germ line; germline precursor cell; and head mesodermal cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including skn-1; hsf-1; and eat-2 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including manganese chloride; D-glucose; and Zidovudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F57B10.4a | |||||||
| F57B10.4b | |||||||||
| F57B10.4c | |||||||||
| F57B10.4d | |||||||||
| Corresponding_transcript | F57B10.4a.1 | ||||||||
| F57B10.4b.1 | |||||||||
| F57B10.4c.1 | |||||||||
| F57B10.4d.1 | |||||||||
| Associated_feature | WBsf643383 | ||||||||
| WBsf217856 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00003839 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00007837 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048820 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033009 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000323 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00082379 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr15015 | ||||||||
| Expr15016 | |||||||||
| Expr15018 | |||||||||
| Expr1022626 | |||||||||
| Expr1038203 | |||||||||
| Expr1152576 | |||||||||
| Expr2004337 | |||||||||
| Expr2022562 | |||||||||
| Drives_construct | WBCnstr00026134 | ||||||||
| Construct_product | WBCnstr00026134 | ||||||||
| Antibody | WBAntibody00002891 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (125) | |||||||||
| Interaction (205) | |||||||||
| Map_info | Positive | Positive_clone | F57B10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 1.21426 | |||||||
| Reference | WBPaper00057635 | ||||||||
| WBPaper00059491 | |||||||||
| WBPaper00059492 | |||||||||
| WBPaper00061461 | |||||||||
| WBPaper00066333 | |||||||||
| Method | Gene |
