WormBase Tree Display for Gene: WBGene00018665
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| WBGene00018665 | SMap | S_parent | Sequence | F52C6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | bath-4 | Person_evidence | WBPerson655 | |||||
| Sequence_name | F52C6.8 | ||||||||
| Molecular_name | F52C6.8 | ||||||||
| F52C6.8.1 | |||||||||
| CE10816 | |||||||||
| Other_name | F52C6.f | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_F52C6.8 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | bath-4 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Aug 2005 16:08:42 | WBPerson2970 | Name_change | CGC_name | bath-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | bath | ||||||||
| Allele (118) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP2052 | ||||||||
| Ortholog (86) | |||||||||
| Paralog (81) | |||||||||
| Structured_description | Automated_description | Enriched in ABalaapppa; ABalapaapa; germ line; germline precursor cell; and head mesodermal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including hsf-1; elt-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including rotenone; stavudine; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; TRAF-like; SKP1/BTB/POZ domain superfamily; and BTB/POZ domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F52C6.8 | |||||||
| Corresponding_transcript | F52C6.8.1 | ||||||||
| Other_sequence | FD515575.1 | ||||||||
| Associated_feature | WBsf986848 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00032597 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015383 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00061823 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076458 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00061824 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047944 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025918 | ||||||||
| Expr1038031 | |||||||||
| Expr1151771 | |||||||||
| Expr2009565 | |||||||||
| Expr2027802 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (109) | |||||||||
| Interaction | WBInteraction000264211 | ||||||||
| WBInteraction000280438 | |||||||||
| WBInteraction000332393 | |||||||||
| WBInteraction000405495 | |||||||||
| Map_info | Map | II | Position | -14.1761 | Error | 0.003433 | |||
| Positive | Positive_clone | F52C6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
