WormBase Tree Display for Gene: WBGene00018362
expand all nodes | collapse all nodes | view schema
WBGene00018362 | SMap | S_parent | Sequence | F42G9 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | ppm-1.G | Laboratory_evidence | GNW | |||
Sequence_name | F42G9.1 | ||||||
Molecular_name | F42G9.1a | ||||||
F42G9.1a.1 | |||||||
CE07231 | |||||||
F42G9.1b | |||||||
CE30788 | |||||||
F42G9.1b.1 | |||||||
Other_name | CELE_F42G9.1 | Accession_evidence | NDB | BX284603 | |||
Public_name | ppm-1.G | ||||||
DB_info | Database (12) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ppm | ||||||
Allele (47) | |||||||
Strain | WBStrain00002761 | ||||||
WBStrain00031466 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (9) | |||||||
Ortholog (20) | |||||||
Paralog | WBGene00001412 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00006460 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00009354 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00011953 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00016580 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00022832 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00021856 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00006524 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Predicted to enable metal ion binding activity and myosin phosphatase activity. Expressed in gonad and head. Is an ortholog of human PPM1G (protein phosphatase, Mg2+/Mn2+ dependent 1G). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F42G9.1a | |||||
F42G9.1b | |||||||
Corresponding_transcript | F42G9.1a.1 | ||||||
F42G9.1b.1 | |||||||
Other_sequence (53) | |||||||
Associated_feature | WBsf644924 | ||||||
WBsf644925 | |||||||
WBsf224394 | |||||||
WBsf224395 | |||||||
Experimental_info | RNAi_result | WBRNAi00014848 | Inferred_automatically | RNAi_primary | |||
WBRNAi00047132 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00032156 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00094196 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00006524 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr4015 | ||||||
Expr6053 | |||||||
Expr1013486 | |||||||
Expr1037909 | |||||||
Expr1151000 | |||||||
Expr2003653 | |||||||
Expr2021872 | |||||||
Drives_construct | WBCnstr00003289 | ||||||
WBCnstr00026580 | |||||||
Construct_product | WBCnstr00026580 | ||||||
Microarray_results (29) | |||||||
Expression_cluster (158) | |||||||
Interaction (62) | |||||||
Map_info | Map | III | Position | -26.0335 | |||
Positive | Positive_clone | F42G9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00015003 | ||||||
WBPaper00038491 | |||||||
WBPaper00049828 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |