WormBase Tree Display for Gene: WBGene00018218
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| WBGene00018218 | SMap | S_parent | Sequence | F40A3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F40A3.3 | |||||||
| Molecular_name | F40A3.3a | ||||||||
| F40A3.3a.1 | |||||||||
| CE10146 | |||||||||
| F40A3.3b | |||||||||
| CE38516 | |||||||||
| F40A3.3c | |||||||||
| CE50258 | |||||||||
| F40A3.3a.2 | |||||||||
| F40A3.3b.1 | |||||||||
| F40A3.3c.1 | |||||||||
| Other_name | CELE_F40A3.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F40A3.3 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (20) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00027616 | ||||||||
| 00027617 | |||||||||
| Ortholog (48) | |||||||||
| Paralog | WBGene00013477 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016979 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00021327 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable lipid binding activity. Located in mitochondrion. Human ortholog(s) of this gene implicated in Alzheimer's disease; ovarian cancer; and prostate cancer. Is an ortholog of human PEBP1 (phosphatidylethanolamine binding protein 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:10652 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8630) | ||||
| DOID:10283 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8630) | ||||||
| DOID:2394 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8630) | ||||||
| Molecular_info | Corresponding_CDS | F40A3.3a | |||||||
| F40A3.3b | |||||||||
| F40A3.3c | |||||||||
| Corresponding_CDS_history | F40A3.3:wp142 | ||||||||
| Corresponding_transcript | F40A3.3a.1 | ||||||||
| F40A3.3a.2 | |||||||||
| F40A3.3b.1 | |||||||||
| F40A3.3c.1 | |||||||||
| Other_sequence (160) | |||||||||
| Associated_feature | WBsf646967 | ||||||||
| WBsf1000540 | |||||||||
| WBsf232034 | |||||||||
| WBsf232035 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00046809 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014618 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089075 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032003 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000979 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011997 | ||||||||
| Expr1037846 | |||||||||
| Expr1150684 | |||||||||
| Expr2003515 | |||||||||
| Expr2021730 | |||||||||
| Drives_construct | WBCnstr00026690 | ||||||||
| Construct_product | WBCnstr00026690 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (122) | |||||||||
| SAGE_tag | SAGE:ctccgagttgcttgttg | Strand | Antisense | ||||||
| SAGE:tcgagagaaacttattt | Strand | Antisense | |||||||
| SAGE:ctccgagttg | Strand | Antisense | |||||||
| Interaction (161) | |||||||||
| Map_info | Positive | Positive_clone | F40A3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 0.923557 | |||||||
| Reference | WBPaper00032014 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
