WormBase Tree Display for Gene: WBGene00018125
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WBGene00018125 | SMap | S_parent | Sequence | F36H12 | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | ||||||||
Name | CGC_name | rmd-4 | Person_evidence (2) | |||||||
Sequence_name | F36H12.11 | |||||||||
Molecular_name | F36H12.11 | |||||||||
Other_name | CELE_F36H12.11 | Accession_evidence | NDB | BX284604 | ||||||
Public_name | rmd-4 | |||||||||
DB_info | Database | AceView | gene | 4G20 | ||||||
WormQTL | gene | WBGene00018125 | ||||||||
WormFlux | gene | WBGene00018125 | ||||||||
NDB | locus_tag | CELE_F36H12.11 | ||||||||
NCBI | gene | 177302 | ||||||||
Species | Caenorhabditis elegans | |||||||||
History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
2 | 20 Nov 2007 10:25:06 | WBPerson2970 | Name_change | CGC_name | rmd-4 | |||||
3 | 17 Oct 2013 17:44:53 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
Status | Live | |||||||||
Gene_info | Biotype | SO:0000336 | ||||||||
Gene_class | rmd | |||||||||
Allele | WBVar00909438 | |||||||||
WBVar00909439 | ||||||||||
WBVar01499365 | ||||||||||
WBVar00909440 | ||||||||||
WBVar01499754 | ||||||||||
WBVar01499395 | ||||||||||
WBVar01499396 | ||||||||||
WBVar01499242 | ||||||||||
WBVar01499633 | ||||||||||
WBVar01500245 | ||||||||||
RNASeq_FPKM (74) | ||||||||||
Ortholog | WBGene00066579 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
Inparanoid_8 | ||||||||||
WBGene00026772 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||||
OMA | ||||||||||
Inparanoid_8 | ||||||||||
WBGene00142298 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
Inparanoid_8 | ||||||||||
WBGene00138135 | Caenorhabditis japonica | From_analysis | OMA | |||||||
TreeFam | ||||||||||
Inparanoid_8 | ||||||||||
WBGene00191028 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
Inparanoid_8 | ||||||||||
Paralog (8) | ||||||||||
Structured_description | Automated_description | Enriched in germ line and in male based on RNA-seq studies. Is affected by several genes including daf-2; eat-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by nine chemicals including Ethanol; methylmercuric chloride; and iron oxide nanoparticle based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | |||||||||
WBPerson37462 | ||||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
Molecular_info | Corresponding_CDS_history | F36H12.11:wp240 | ||||||||
Corresponding_pseudogene | F36H12.11 | |||||||||
Other_sequence | GW412750.1 | |||||||||
PSC01516 | ||||||||||
Experimental_info | Expr_pattern | Expr1150408 | ||||||||
Microarray_results | SMD_F36H12.11 | |||||||||
Aff_F36H12.11 | ||||||||||
Expression_cluster (57) | ||||||||||
Interaction (281) | ||||||||||
Map_info | Map | IV | Position | 1.58201 | ||||||
Positive | Positive_clone | F36H12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
Pseudo_map_position | ||||||||||
Reference | WBPaper00038491 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |