WormBase Tree Display for Gene: WBGene00017713
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WBGene00017713 | SMap | S_parent | Sequence | F22E5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F22E5.20 | |||||||
Molecular_name | F22E5.20 | ||||||||
F22E5.20.1 | |||||||||
CE33623 | |||||||||
Other_name | CELE_F22E5.20 | Accession_evidence | NDB | BX284602 | |||||
Public_name | F22E5.20 | ||||||||
DB_info | Database | AceView | gene | 2C962 | |||||
WormQTL | gene | WBGene00017713 | |||||||
WormFlux | gene | WBGene00017713 | |||||||
NDB | locus_tag | CELE_F22E5.20 | |||||||
NCBI | gene | 3565664 | |||||||
RefSeq | protein | NM_001026939.4 | |||||||
TREEFAM | TREEFAM_ID | TF322477 | |||||||
TrEMBL | UniProtAcc | Q7KQ96 | |||||||
UniProt_GCRP | UniProtAcc | Q7KQ96 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (37) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | chrII_pilon.g3746 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
Paralog | WBGene00019040 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WBGene00022560 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00018021 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00019037 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00022557 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00021299 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WormBase-Compara | |||||||||
Structured_description | Concise_description | F22E5.20 encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enriched in several structures, including ABalapapapa; ABalapppapa; ABalppappa; ABalpppapa; and ciliated neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on tiling array; microarray; and RNA-seq studies. Is affected by eleven chemicals including hydrogen sulfide; mianserin; and Psoralens based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F22E5.20 | |||||||
Corresponding_transcript | F22E5.20.1 | ||||||||
Associated_feature | WBsf649934 | ||||||||
WBsf987005 | |||||||||
WBsf222778 | |||||||||
Experimental_info | RNAi_result | WBRNAi00045337 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1014440 | ||||||||
Expr1037600 | |||||||||
Expr1149261 | |||||||||
Expr2002869 | |||||||||
Expr2021086 | |||||||||
Drives_construct | WBCnstr00027080 | ||||||||
Construct_product | WBCnstr00027080 | ||||||||
Microarray_results (13) | |||||||||
Expression_cluster (111) | |||||||||
Map_info | Positive | Positive_clone | F22E5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | -12.1607 | |||||||
Method | Gene |