WormBase Tree Display for Gene: WBGene00017678
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WBGene00017678 | SMap | S_parent | Sequence | F21F8 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | asp | |||||
Allele (42) | ||||||
Strain | WBStrain00055352 | |||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00024932 | |||||
00024933 | ||||||
00024934 | ||||||
00024935 | ||||||
00024936 | ||||||
00024937 | ||||||
00024938 | ||||||
00024939 | ||||||
00122998 | ||||||
00122999 | ||||||
Contained_in_operon | CEOP5539 | |||||
Ortholog (32) | ||||||
Paralog (17) | ||||||
Structured_description | Automated_description | Predicted to enable aspartic-type endopeptidase activity. Involved in innate immune response. Predicted to be located in lysosome. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); chronic fatigue syndrome; and congenital adrenal hyperplasia. Is an ortholog of human REN (renin). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed (2) | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model (17) | |||||
Molecular_info | Corresponding_CDS | F21F8.4 | ||||
Corresponding_transcript | F21F8.4.1 | |||||
F21F8.4.2 | ||||||
Other_sequence (69) | ||||||
Associated_feature | WBsf646997 | |||||
WBsf1000612 | ||||||
WBsf232088 | ||||||
Experimental_info | RNAi_result | WBRNAi00045230 | Inferred_automatically | RNAi_primary | ||
WBRNAi00045229 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00013693 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00115183 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00089050 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00076325 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1018685 | |||||
Expr1149161 | ||||||
Expr2009460 | ||||||
Drives_construct | WBCnstr00027108 | |||||
Construct_product | WBCnstr00027108 | |||||
Microarray_results (19) | ||||||
Expression_cluster (338) | ||||||
Interaction (32) | ||||||
Map_info | Map | V | Position | 1.26094 | ||
Positive | Positive_clone | F21F8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference | WBPaper00028482 | |||||
WBPaper00038491 | ||||||
WBPaper00055090 | ||||||
WBPaper00060662 | ||||||
WBPaper00062322 | ||||||
WBPaper00064284 | ||||||
WBPaper00064728 | ||||||
WBPaper00064841 | ||||||
WBPaper00065681 | ||||||
WBPaper00065877 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |