WormBase Tree Display for Gene: WBGene00017567
expand all nodes | collapse all nodes | view schema
| WBGene00017567 | SMap | S_parent | Sequence | F18E3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F18E3.11 | |||||||
| Molecular_name | F18E3.11 | ||||||||
| F18E3.11.1 | |||||||||
| CE36537 | |||||||||
| Other_name | CELE_F18E3.11 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F18E3.11 | ||||||||
| DB_info | Database | AceView | gene | 5H895 | |||||
| WormFlux | gene | WBGene00017567 | |||||||
| NDB | locus_tag | CELE_F18E3.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017567|UniProtKB=Q6LCK7 | |||||||
| family | PTHR39383 | ||||||||
| NCBI | gene | 259628 | |||||||
| RefSeq | protein | NM_001028645.7 | |||||||
| TREEFAM | TREEFAM_ID | TF343243 | |||||||
| TrEMBL | UniProtAcc | Q6LCK7 | |||||||
| UniProt_GCRP | UniProtAcc | Q6LCK7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar00462528 | ||||||||
| WBVar01499740 | |||||||||
| WBVar01024727 | |||||||||
| WBVar01024728 | |||||||||
| WBVar01500129 | |||||||||
| WBVar01499056 | |||||||||
| WBVar01499496 | |||||||||
| WBVar01499316 | |||||||||
| WBVar00211897 | |||||||||
| WBVar01500066 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (48) | |||||||||
| Paralog | WBGene00045276 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00045275 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in PLM; SMB; amphid neurons; germline precursor cell; and hypodermis based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty-six chemicals including hydrogen sulfide; rotenone; and Tunicamycin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F18E3.11 | |||||||
| Corresponding_transcript | F18E3.11.1 | ||||||||
| Other_sequence | CJC14597_1 | ||||||||
| FD514404.1 | |||||||||
| CSC02341_1 | |||||||||
| CSC00562_1 | |||||||||
| FD514405.1 | |||||||||
| FD514873.1 | |||||||||
| CJC08330_1 | |||||||||
| FD514638.1 | |||||||||
| Associated_feature | WBsf646936 | ||||||||
| WBsf646937 | |||||||||
| WBsf231974 | |||||||||
| Experimental_info | Expr_pattern | Expr1017625 | |||||||
| Expr1037544 | |||||||||
| Expr1148916 | |||||||||
| Expr2002714 | |||||||||
| Expr2020930 | |||||||||
| Drives_construct | WBCnstr00027199 | ||||||||
| Construct_product | WBCnstr00027199 | ||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (205) | |||||||||
| Map_info | Positive | Positive_clone | F18E3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 0.749095 | |||||||
| Method | Gene |
