WormBase Tree Display for Gene: WBGene00045276
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WBGene00045276 | SMap | S_parent | Sequence | F18E3 | ||||
---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | ||||||
Name | Sequence_name | F18E3.13 | ||||||
Molecular_name | F18E3.13 | |||||||
F18E3.13.1 | ||||||||
CE40695 | ||||||||
Other_name | CELE_F18E3.13 | Accession_evidence | NDB | BX284605 | ||||
Public_name | F18E3.13 | |||||||
DB_info | Database | AceView | gene | 5H897 | ||||
WormFlux | gene | WBGene00045276 | ||||||
NDB | locus_tag | CELE_F18E3.13 | ||||||
Panther | gene | CAEEL|WormBase=WBGene00045276|UniProtKB=A3FPJ5 | ||||||
family | PTHR39383 | |||||||
NCBI | gene | 6418730 | ||||||
RefSeq | protein | NM_001129451.4 | ||||||
TREEFAM | TREEFAM_ID | TF343243 | ||||||
TrEMBL | UniProtAcc | A3FPJ5 | ||||||
UniProt_GCRP | UniProtAcc | A3FPJ5 | ||||||
Species | Caenorhabditis elegans | |||||||
History | Version_change | 1 | 02 Feb 2007 11:25:37 | WBPerson1849 | Event | Created | ||
Status | Live | |||||||
Gene_info | Biotype | SO:0001217 | ||||||
Allele (11) | ||||||||
RNASeq_FPKM (74) | ||||||||
Ortholog (47) | ||||||||
Paralog | WBGene00017567 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | ||||||||
Panther | ||||||||
WormBase-Compara | ||||||||
WBGene00045275 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Inparanoid_8 | ||||||||
Panther | ||||||||
WormBase-Compara | ||||||||
Structured_description | Automated_description | Enriched in germline precursor cell; hypodermis; intestine; pharyngeal muscle cell; and sensory neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on RNA-seq and microarray studies. Is affected by nineteen chemicals including rotenone; Tunicamycin; and D-glucose based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | |||||||
WBPerson37462 | ||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
Molecular_info | Corresponding_CDS | F18E3.13 | ||||||
Corresponding_transcript | F18E3.13.1 | |||||||
Other_sequence | CBC02034_1 | |||||||
Associated_feature | WBsf646939 | |||||||
WBsf661423 | ||||||||
WBsf231976 | ||||||||
Experimental_info | Expr_pattern | Expr1029080 | ||||||
Expr1040359 | ||||||||
Expr1148918 | ||||||||
Expr2002716 | ||||||||
Expr2020932 | ||||||||
Drives_construct | WBCnstr00023275 | |||||||
Construct_product | WBCnstr00023275 | |||||||
Microarray_results | A_12_P132504 | |||||||
GPL14144_F18E3.13_142-201_0.959_2_A | ||||||||
GPL14144_F18E3.13_59-118_0.915_16_B | ||||||||
GPL19516_CGZ0016898 | ||||||||
GPL21109_F18E3.13 | ||||||||
Expression_cluster (185) | ||||||||
Map_info | Positive | Positive_clone | F18E3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Interpolated_map_position | V | 0.749126 | ||||||
Method | Gene |