WormBase Tree Display for Gene: WBGene00017316
expand all nodes | collapse all nodes | view schema
| WBGene00017316 | SMap | S_parent | Sequence | F09G2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F09G2.8 | |||||||
| Molecular_name | F09G2.8a | ||||||||
| F09G2.8a.1 | |||||||||
| CE09303 | |||||||||
| F09G2.8b | |||||||||
| CE41221 | |||||||||
| F09G2.8b.1 | |||||||||
| Other_name | CELE_F09G2.8 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F09G2.8 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (82) | |||||||||
| Strain | WBStrain00002963 | ||||||||
| WBStrain00003588 | |||||||||
| WBStrain00055382 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00029779 | ||||||||
| 00029780 | |||||||||
| 00029781 | |||||||||
| 00029782 | |||||||||
| 00029783 | |||||||||
| 00029784 | |||||||||
| 00029785 | |||||||||
| 00029786 | |||||||||
| 00122745 | |||||||||
| Contained_in_operon | CEOP5140 | ||||||||
| Ortholog (42) | |||||||||
| Paralog | WBGene00013080 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017124 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020256 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable N-acylphosphatidylethanolamine-specific phospholipase D activity and phospholipase D activity. Predicted to be involved in lipid catabolic process. Predicted to be located in membrane. Expressed in tail. Human ortholog(s) of this gene implicated in spinocerebellar ataxia 46. Is an ortholog of human PLD3 (phospholipase D family member 3) and PLD4 (phospholipase D family member 4). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080288 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17158) | ||||
| Molecular_info | Corresponding_CDS | F09G2.8a | |||||||
| F09G2.8b | |||||||||
| Corresponding_CDS_history | F09G2.8:wp177 | ||||||||
| Corresponding_transcript | F09G2.8a.1 | ||||||||
| F09G2.8b.1 | |||||||||
| Other_sequence (24) | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00030731 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00044180 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013014 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007975 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1128 | ||||||||
| Expr5706 | |||||||||
| Expr5707 | |||||||||
| Expr1026798 | |||||||||
| Expr1037445 | |||||||||
| Expr1148140 | |||||||||
| Expr2002364 | |||||||||
| Expr2020582 | |||||||||
| Drives_construct | WBCnstr00003469 | ||||||||
| WBCnstr00027394 | |||||||||
| Construct_product | WBCnstr00027394 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (134) | |||||||||
| Interaction (193) | |||||||||
| Map_info | Positive | Positive_clone | F09G2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 0.629124 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
