WormBase Tree Display for Gene: WBGene00020256
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| WBGene00020256 | SMap | S_parent | Sequence | T05C3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T05C3.6 | |||||||
| Molecular_name | T05C3.6a | ||||||||
| T05C3.6a.1 | |||||||||
| CE41257 | |||||||||
| T05C3.6b | |||||||||
| CE41258 | |||||||||
| T05C3.6b.1 | |||||||||
| Other_name | CELE_T05C3.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | T05C3.6 | ||||||||
| DB_info | Database | AceView | gene | 5F969 | |||||
| WormQTL | gene | WBGene00020256 | |||||||
| WormFlux | gene | WBGene00020256 | |||||||
| NDB | locus_tag | CELE_T05C3.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020256|UniProtKB=H2KZ05 | |||||||
| family | PTHR10185 | ||||||||
| NCBI | gene | 178931 | |||||||
| RefSeq | protein | NM_001129529.4 | |||||||
| NM_001129528.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF313378 | |||||||
| TrEMBL | UniProtAcc | A6PVA4 | |||||||
| H2KZ05 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KZ05 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (59) | |||||||||
| Strain | WBStrain00055207 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00005009 | ||||||||
| 00124931 | |||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00013080 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017124 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017316 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | The T05C3.6 gene encodes a paralog of T05C3.2, a protein with NACHT and WD domains that may be involved in apoptosis. | Paper_evidence | WBPaper00004589 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable catalytic activity. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T05C3.6a | |||||||
| T05C3.6b | |||||||||
| Corresponding_CDS_history | T05C3.6:wp177 | ||||||||
| Corresponding_transcript | T05C3.6a.1 | ||||||||
| T05C3.6b.1 | |||||||||
| Other_sequence (18) | |||||||||
| Associated_feature | WBsf646806 | ||||||||
| WBsf661261 | |||||||||
| WBsf231763 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052502 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1021480 | ||||||||
| Expr1038817 | |||||||||
| Expr1156126 | |||||||||
| Expr2005874 | |||||||||
| Expr2024090 | |||||||||
| Drives_construct | WBCnstr00025262 | ||||||||
| Construct_product | WBCnstr00025262 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (183) | |||||||||
| Interaction | WBInteraction000231663 | ||||||||
| WBInteraction000285609 | |||||||||
| WBInteraction000390493 | |||||||||
| WBInteraction000411790 | |||||||||
| WBInteraction000467277 | |||||||||
| WBInteraction000468123 | |||||||||
| WBInteraction000541095 | |||||||||
| WBInteraction000541096 | |||||||||
| WBInteraction000551547 | |||||||||
| Map_info | Positive | Positive_clone | T05C3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -1.811 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065331 | |||||||||
| Method | Gene |
