WormBase Tree Display for Gene: WBGene00017250
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| WBGene00017250 | SMap | S_parent | Sequence | F08D12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F08D12.7 | |||||||
| Molecular_name | F08D12.7 | ||||||||
| F08D12.7.1 | |||||||||
| CE27927 | |||||||||
| Other_name | CELE_F08D12.7 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F08D12.7 | ||||||||
| DB_info | Database | AceView | gene | 2D56 | |||||
| WormQTL | gene | WBGene00017250 | |||||||
| WormFlux | gene | WBGene00017250 | |||||||
| NDB | locus_tag | CELE_F08D12.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017250|UniProtKB=P91230 | |||||||
| family | PTHR31897 | ||||||||
| NCBI | gene | 173621 | |||||||
| RefSeq | protein | NM_061955.3 | |||||||
| TREEFAM | TREEFAM_ID | TF315866 | |||||||
| TrEMBL | UniProtAcc | P91230 | |||||||
| UniProt_GCRP | UniProtAcc | P91230 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (44) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Paralog (27) | |||||||||
| Structured_description | Concise_description | F08D12.7 encodes a novel protein conserved amongst Caenorhaditis species; although loss of F08D12.7 activity via RNAi results in no obvious defects, F08D12.7 transcripts are enriched in L1-stage muscle and upregulated in L2 larvae in response to overexpression of hlh-2 and hlh-8; in addition, in analyses of the early embryonic transcriptome, F08D12.7 transcripts are classified as strictly maternal; an F08D12.7::gfp reporter fusion is expressed in the vm1 and vm2 vulval muscles, the intestinal and anal depressor muscles, the hypodermis, distal tip cell, ventral nerve cord, head and tail neurons, and body wall muscle. | Paper_evidence | WBPaper00005428 | |||||
| WBPaper00005767 | |||||||||
| WBPaper00027104 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 21 Mar 2007 00:00:00 | ||||||||
| Automated_description | Expressed in several structures, including enteric muscle; hermaphrodite distal tip cell; neurons; ventral nerve cord; and vulval muscle. Is predicted to encode a protein with the following domains: Domain of unknown function DUF19 and Domain of unknown function (DUF19). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F08D12.7 | |||||||
| Corresponding_transcript | F08D12.7.1 | ||||||||
| Associated_feature | WBsf222796 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00012885 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043995 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000945 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030646 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3891 | ||||||||
| Expr1019129 | |||||||||
| Expr1147966 | |||||||||
| Expr2002289 | |||||||||
| Expr2020508 | |||||||||
| Drives_construct | WBCnstr00011723 | ||||||||
| WBCnstr00027455 | |||||||||
| Construct_product | WBCnstr00027455 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (118) | |||||||||
| Interaction | WBInteraction000323634 | ||||||||
| WBInteraction000544282 | |||||||||
| Map_info | Positive | Positive_clone | F08D12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -11.6544 | |||||||
| Reference | WBPaper00027104 | ||||||||
| Method | Gene |
