WormBase Tree Display for Gene: WBGene00017161

WBGene00017161 SMap: S_parent: Sequence: F01F1
  Identity: Version: 2
    Name: CGC_name: rabn-5 Person_evidence: WBPerson217
      Sequence_name: F01F1.4
      Molecular_name: F01F1.4
        F01F1.4.1
        CE01230
      Other_name: CELE_F01F1.4 Accession_evidence: NDB BX284603
      Public_name: rabn-5
    DB_info: Database: AceView gene 3G955
        WormQTL gene WBGene00017161
        WormFlux gene WBGene00017161
        NDB locus_tag CELE_F01F1.4
        Panther gene CAEEL|WormBase=WBGene00017161|UniProtKB=Q19088
          family PTHR31179
        NCBI gene 175823
        RefSeq protein NM_065865.7
        TREEFAM TREEFAM_ID TF317292
        TrEMBL UniProtAcc Q19088
        UniProt_GCRP UniProtAcc Q19088
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 04 Nov 2004 16:11:20 WBPerson2970 Name_change: CGC_name: rabn-5
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rabn
    Allele (31)
    Strain: WBStrain00032069
    RNASeq_FPKM (74)
    GO_annotation: 00063434
      00063435
      00063436
      00122610
      00122611
      00122612
    Ortholog (37)
    Structured_description: Concise_description: rabn-5 encodes the C. elegans ortholog of Rabaptin-5, a Rab5 effector protein; RABN-5 physically interacts with RABX-5, a RAB-5 guanine-nucleotide exchange factor (GEF); genetic studies indicate that rabn-5 functions redundantly with rme-6 in nematode larval development, particularly with respect to regulation of the molting cycle. Paper_evidence: WBPaper00025193
          Curator_confirmed: WBPerson1843
          Date_last_updated: 24 Aug 2011 00:00:00
      Automated_description: Enables GTPase activating protein binding activity. Involved in molting cycle. Is an ortholog of human RABEP1 (rabaptin, RAB GTPase binding effector protein 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F01F1.4
    Corresponding_transcript: F01F1.4.1
    Other_sequence (26)
    Associated_feature: WBsf645219
      WBsf659001
      WBsf992560
      WBsf992561
      WBsf992562
      WBsf1014971
      WBsf1014972
      WBsf225011
      WBsf225012
  Experimental_info: RNAi_result: WBRNAi00043755 Inferred_automatically: RNAi_primary
      WBRNAi00012740 Inferred_automatically: RNAi_primary
      WBRNAi00030541 Inferred_automatically: RNAi_primary
      WBRNAi00005104 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1019477
      Expr1037375
      Expr1147734
      Expr2015233
      Expr2033467
    Drives_construct: WBCnstr00027521
    Construct_product: WBCnstr00027521
    Microarray_results (20)
    Expression_cluster (79)
    Interaction (65)
  Map_info: Map: III Position: -1.43825 Error: 8e-05
    Positive: Positive_clone: F01F1 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4963
    Pseudo_map_position
  Reference: WBPaper00013595
    WBPaper00025193
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene