WormBase Tree Display for Gene: WBGene00016892
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WBGene00016892 | SMap | S_parent | Sequence | C53A3 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | pgph-3 | Person_evidence | WBPerson1352 | |||
Sequence_name | C53A3.2 | ||||||
Molecular_name | C53A3.2 | ||||||
C53A3.2.1 | |||||||
CE16942 | |||||||
Other_name | CELE_C53A3.2 | Accession_evidence | NDB | BX284605 | |||
Public_name | pgph-3 | ||||||
DB_info | Database | AceView | gene | 5G242 | |||
WormQTL | gene | WBGene00016892 | |||||
WormFlux | gene | WBGene00016892 | |||||
NDB | locus_tag | CELE_C53A3.2 | |||||
Panther | gene | CAEEL|WormBase=WBGene00016892|UniProtKB=O44538 | |||||
family | PTHR19288 | ||||||
NCBI | gene | 178964 | |||||
RefSeq | protein | NM_072110.6 | |||||
TrEMBL | UniProtAcc | O44538 | |||||
UniProt_GCRP | UniProtAcc | O44538 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | pgph | ||||||
Allele (12) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00032788 | ||||||
00032789 | |||||||
00032790 | |||||||
00032791 | |||||||
00122398 | |||||||
Ortholog (79) | |||||||
Paralog | WBGene00007548 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00016664 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00019522 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00019604 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00018424 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Predicted to enable phosphatase activity. Predicted to be located in cytoplasm. Is an ortholog of human PDXP (pyridoxal phosphatase) and PGP (phosphoglycolate phosphatase). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C53A3.2 | |||||
Corresponding_transcript | C53A3.2.1 | ||||||
Other_sequence (61) | |||||||
Associated_feature | WBsf652649 | ||||||
WBsf718314 | |||||||
WBsf1019684 | |||||||
WBsf233721 | |||||||
Experimental_info (7) | |||||||
Map_info | Map | V | Position | -1.00941 | |||
Positive | Positive_clone | C53A3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00027108 | ||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
WBPaper00062352 | |||||||
WBPaper00063033 | |||||||
WBPaper00065341 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |