WormBase Tree Display for Gene: WBGene00016892
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WBGene00016892 | SMap | S_parent | Sequence | C53A3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | pgph-3 | Person_evidence | WBPerson1352 | |||||
Sequence_name | C53A3.2 | ||||||||
Molecular_name | C53A3.2 | ||||||||
C53A3.2.1 | |||||||||
CE16942 | |||||||||
Other_name | CELE_C53A3.2 | Accession_evidence | NDB | BX284605 | |||||
Public_name | pgph-3 | ||||||||
DB_info | Database (9) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Name_change | CGC_name | pgph-3 | |||||||
2 | 23 Sep 2018 21:25:24 | WBPerson1983 | Name_change | CGC_name | pgph-3 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | pgph | ||||||||
Allele (12) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00032788 | ||||||||
00032789 | |||||||||
00032790 | |||||||||
00032791 | |||||||||
00122398 | |||||||||
Ortholog (79) | |||||||||
Paralog | WBGene00007548 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00016664 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00019522 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00019604 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00018424 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable phosphatase activity. Predicted to be located in cytoplasm. Is an ortholog of human PDXP (pyridoxal phosphatase) and PGP (phosphoglycolate phosphatase). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (4) | |||||||||
Experimental_info | RNAi_result (11) | ||||||||
Expr_pattern | Chronogram840 | ||||||||
Expr5575 | |||||||||
Expr1018417 | |||||||||
Expr1037249 | |||||||||
Expr1147017 | |||||||||
Expr2001873 | |||||||||
Expr2020099 | |||||||||
Drives_construct | WBCnstr00004425 | ||||||||
WBCnstr00027722 | |||||||||
Construct_product | WBCnstr00027722 | ||||||||
Microarray_results (12) | |||||||||
Expression_cluster (297) | |||||||||
Interaction (15) | |||||||||
Map_info | Map | V | Position | -1.00941 | |||||
Positive | Positive_clone | C53A3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00027108 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00062352 | |||||||||
WBPaper00063033 | |||||||||
WBPaper00065341 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |