WormBase Tree Display for Gene: WBGene00016732
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WBGene00016732 | SMap | S_parent | Sequence | C46H11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | phat-1 | Person_evidence | WBPerson980 | |||||
WBPerson3905 | |||||||||
Sequence_name | C46H11.8 | ||||||||
Molecular_name | C46H11.8 | ||||||||
C46H11.8.1 | |||||||||
CE34274 | |||||||||
Other_name | CELE_C46H11.8 | Accession_evidence | NDB | BX284601 | |||||
Public_name | phat-1 | ||||||||
DB_info | Database | AceView | gene | 1F612 | |||||
WormQTL | gene | WBGene00016732 | |||||||
WormFlux | gene | WBGene00016732 | |||||||
NDB | locus_tag | CELE_C46H11.8 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00016732|UniProtKB=Q9GYJ3 | |||||||
family | PTHR46219 | ||||||||
NCBI | gene | 172129 | |||||||
RefSeq | protein | NM_059107.3 | |||||||
TREEFAM | TREEFAM_ID | TF318899 | |||||||
TrEMBL | UniProtAcc | Q9GYJ3 | |||||||
UniProt_GCRP | UniProtAcc | Q9GYJ3 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 02 Feb 2006 09:28:57 | WBPerson2970 | Name_change | CGC_name | phat-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | phat | ||||||||
Allele (25) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00092742 | ||||||||
Ortholog (41) | |||||||||
Paralog (61) | |||||||||
Structured_description | Automated_description | Involved in pharyngeal gland morphogenesis. Expressed in pharyngeal gland cell. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C46H11.8 | |||||||
Corresponding_CDS_history | C46H11.8:wp101 | ||||||||
Corresponding_transcript | C46H11.8.1 | ||||||||
Other_sequence | PT04027 | ||||||||
Oden_isotig16180 | |||||||||
DV019143.1 | |||||||||
Tcir_isotig08744 | |||||||||
DV019396.1 | |||||||||
Name_isotig06303 | |||||||||
PTC04675_1 | |||||||||
FD516663.1 | |||||||||
CSC00108_1 | |||||||||
Associated_feature | WBsf047524 | ||||||||
WBsf649133 | |||||||||
WBsf219356 | |||||||||
Experimental_info | RNAi_result | WBRNAi00042631 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00003171 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00029882 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr8574 | ||||||||
Expr10163 | |||||||||
Expr1023120 | |||||||||
Expr1037183 | |||||||||
Expr1146615 | |||||||||
Expr2014882 | |||||||||
Expr2033117 | |||||||||
Drives_construct | WBCnstr00005327 | ||||||||
WBCnstr00013372 | |||||||||
WBCnstr00014757 | |||||||||
WBCnstr00017920 | |||||||||
WBCnstr00018257 | |||||||||
WBCnstr00018269 | |||||||||
WBCnstr00027846 | |||||||||
Construct_product | WBCnstr00027846 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (145) | |||||||||
Interaction (108) | |||||||||
Map_info | Map | I | Position | -0.423078 | Error | 0.000245 | |||
Positive | Positive_clone | C46H11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00032277 | ||||||||
WBPaper00036955 | |||||||||
WBPaper00038636 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |