WormBase Tree Display for Gene: WBGene00016729
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WBGene00016729 | SMap | S_parent | Sequence | C46H11 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (14) | ||||||
Strain | WBStrain00052076 | |||||
RNASeq_FPKM (74) | ||||||
GO_annotation (13) | ||||||
Ortholog (36) | ||||||
Paralog | WBGene00000205 | Caenorhabditis elegans | From_analysis | TreeFam | ||
Inparanoid_8 | ||||||
Panther | ||||||
WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable actin filament binding activity. Predicted to be involved in Arp2/3 complex-mediated actin nucleation and cell migration. Predicted to be located in cytoplasm. Predicted to be part of Arp2/3 protein complex. Human ortholog(s) of this gene implicated in lung squamous cell carcinoma. Is an ortholog of human ARPC5 (actin related protein 2/3 complex subunit 5) and ARPC5L (actin related protein 2/3 complex subunit 5 like). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model | DOID:612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:708) | |
DOID:3908 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:708) | |||
DOID:3907 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:708) | |||
Molecular_info | Corresponding_CDS | C46H11.3 | ||||
Corresponding_transcript | C46H11.3.1 | |||||
Associated_feature | WBsf217615 | |||||
Experimental_info | RNAi_result | WBRNAi00094928 | Inferred_automatically | RNAi_primary | ||
WBRNAi00022829 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00042626 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00003166 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00029879 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1014216 | |||||
Expr1146611 | ||||||
Expr2001696 | ||||||
Expr2019923 | ||||||
Drives_construct | WBCnstr00027849 | |||||
Construct_product | WBCnstr00027849 | |||||
Microarray_results (22) | ||||||
Expression_cluster (41) | ||||||
Interaction (19) | ||||||
Map_info | Positive | Positive_clone | C46H11 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | I | -0.423255 | ||||
Reference | WBPaper00038491 | |||||
WBPaper00055090 | ||||||
Method | Gene |