WormBase Tree Display for Gene: WBGene00016688
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| WBGene00016688 | SMap | S_parent | Sequence | C45H4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | srbc-18 | Person_evidence | WBPerson522 | ||||||
| Sequence_name | C45H4.6 | |||||||||
| Molecular_name | C45H4.6 | |||||||||
| Other_name | CELE_C45H4.6 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | srbc-18 | |||||||||
| DB_info | Database | AceView | gene | 5C647 | ||||||
| WormQTL | gene | WBGene00016688 | ||||||||
| WormFlux | gene | WBGene00016688 | ||||||||
| NDB | locus_tag | CELE_C45H4.6 | ||||||||
| NCBI | gene | 183487 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 03 Feb 2005 11:21:21 | WBPerson2970 | Name_change | CGC_name | srbc-18 | |||||
| 3 | 09 Sep 2015 15:23:47 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | srbc | |||||||||
| Allele (24) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00031889 | Caenorhabditis briggsae | From_analysis | OMA | ||||||
| WBGene00191758 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| WBGene00164119 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| WBGene00057853 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| WBGene00126242 | Caenorhabditis japonica | From_analysis | TreeFam | |||||||
| Paralog (74) | ||||||||||
| Structured_description | Automated_description | Enriched in DA neuron and VA neuron based on tiling array studies. Is affected by several genes including clk-1; drh-3; and rsr-2 based on tiling array; RNA-seq; and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | C45H4.6:wp125 | ||||||||
| C45H4.6:wp138 | ||||||||||
| C45H4.6:wp230 | ||||||||||
| C45H4.6:wp250 | ||||||||||
| Corresponding_pseudogene | C45H4.6 | |||||||||
| Associated_feature | WBsf999465 | |||||||||
| Experimental_info | Expr_pattern | Expr1019640 | ||||||||
| Expr1146554 | ||||||||||
| Microarray_results (12) | ||||||||||
| Expression_cluster (33) | ||||||||||
| Interaction (58) | ||||||||||
| Map_info | Map | V | Position | -15.6238 | Error | 0.006593 | ||||
| Positive | Positive_clone | C45H4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
