WormBase Tree Display for Gene: WBGene00016588

WBGene00016588 SMap: S_parent: Sequence: C42C1
  Identity: Version: 4
    Name: CGC_name: hpo-12 Paper_evidence: WBPaper00038231
          Person_evidence: WBPerson26
      Sequence_name: C42C1.10
      Molecular_name: C42C1.10
        C42C1.10.1
        CE29222
        C42C1.10.2
      Other_name: CELE_C42C1.10 Accession_evidence: NDB BX284604
      Public_name: hpo-12
    DB_info: Database: AceView gene 4N47
        WormQTL gene WBGene00016588
        WormFlux gene WBGene00016588
        NDB locus_tag CELE_C42C1.10
        NCBI gene 36804989
        RefSeq protein NM_001392411.1
        TrEMBL UniProtAcc A3QMB9
        UniProt_GCRP UniProtAcc A3QMB9
        OMIM gene 606521
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 26 Apr 2011 13:31:47 WBPerson2970 Name_change: CGC_name: hpo-12
        3 10 Jun 2014 12:12:12 WBPerson1983 Event: Acquires_merge: WBGene00016593
        4 06 Mar 2018 14:45:19 WBPerson4025 Event: Split_into: WBGene00302978
      Acquires_merge: WBGene00016593
      Split_into: WBGene00302978
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hpo
    Allele (32)
    Strain: WBStrain00032586
    RNASeq_FPKM (74)
    GO_annotation: 00004367
      00004368
      00004369
      00004370
      00004371
      00004372
      00122163
    Contained_in_operon: CEOP4508
      CEOP5599
    Ortholog (37)
    Paralog (36)
    Structured_description: Automated_description: Predicted to enable thiamine transmembrane transporter activity. Predicted to be involved in thiamine pyrophosphate transmembrane transport. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in inherited metabolic disorder and microcephaly. Is an ortholog of human SLC25A19 (solute carrier family 25 member 19). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:10907 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:14409)
      DOID:655 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:14409)
  Molecular_info: Corresponding_CDS: C42C1.10
    Corresponding_CDS_history: C42C1.10a:wp264
      C42C1.10b:wp219
      C42C1.10b:wp264
      C42C1.10c:wp264
      C42C1.10d:wp264
    Corresponding_transcript: C42C1.10.1
      C42C1.10.2
    Other_sequence (27)
    Associated_feature: WBsf660799
      WBsf998069
      WBsf229269
  Experimental_info: RNAi_result: WBRNAi00088614 Inferred_automatically: RNAi_primary
      WBRNAi00042329 Inferred_automatically: RNAi_primary
      WBRNAi00011858 Inferred_automatically: RNAi_primary
      WBRNAi00088721 Inferred_automatically: RNAi_primary
      WBRNAi00024798 Inferred_automatically: RNAi_primary
      WBRNAi00042330 Inferred_automatically: RNAi_primary
      WBRNAi00027220 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027070
      Expr1037118
      Expr1146323
      Expr2012557
      Expr2030794
    Drives_construct: WBCnstr00027954
      WBCnstr00027959
    Construct_product: WBCnstr00027954
      WBCnstr00027959
    Microarray_results (19)
    Expression_cluster (63)
    Interaction (59)
  Map_info: Map: IV Position: 5.83418 Error: 0.000997
    Positive: Positive_clone: C42C1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
    [140610 pad] Gene was missing Acquires_merge Event history data so inferred from Acquires_merge tag.
  Method: Gene