WormBase Tree Display for Gene: WBGene00016422
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WBGene00016422 | SMap | S_parent | Sequence | C34G6 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | noah-1 | Person_evidence | WBPerson545 | |||||
WBPerson3379 | |||||||||
Sequence_name | C34G6.6 | ||||||||
Molecular_name | C34G6.6a | ||||||||
C34G6.6a.1 | |||||||||
CE47123 | |||||||||
C34G6.6b | |||||||||
CE47472 | |||||||||
C34G6.6c | |||||||||
CE47456 | |||||||||
C34G6.6b.1 | |||||||||
C34G6.6c.1 | |||||||||
Other_name | CELE_C34G6.6 | Accession_evidence | NDB | BX284601 | |||||
Public_name | noah-1 | ||||||||
DB_info | Database | AceView | gene | 1G452 | |||||
WormQTL | gene | WBGene00016422 | |||||||
WormFlux | gene | WBGene00016422 | |||||||
NDB | locus_tag | CELE_C34G6.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00016422|UniProtKB=H8W3Y1 | |||||||
family | PTHR47327 | ||||||||
NCBI | gene | 172261 | |||||||
RefSeq | protein | NM_171838.8 | |||||||
NM_170870.9 | |||||||||
NM_001263093.4 | |||||||||
TREEFAM | TREEFAM_ID | TF326431 | |||||||
TrEMBL | UniProtAcc | Q8T3B7 | |||||||
H2KZ73 | |||||||||
H8W3Y1 | |||||||||
UniProt_GCRP | UniProtAcc | H8W3Y1 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 28 Jul 2005 14:10:17 | WBPerson2970 | Name_change | CGC_name | noah-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | noah | ||||||||
Allele (53) | |||||||||
Strain | WBStrain00036349 | ||||||||
WBStrain00026588 | |||||||||
WBStrain00054765 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00022109 | ||||||||
00022110 | |||||||||
Ortholog (33) | |||||||||
Paralog (15) | |||||||||
Structured_description | Concise_description | noah-1 encodes a PAN and ZP domain-containing protein that is related to the Drosophila extracellular matrix component NompA (no-mechanoreceptor-potential A); loss of noah-1 function via RNAi indicates that NOAH-1 activity is essential for molting; in addition, NOAH-1 appears to be required for embryonic and larval development, vulval development, coordinated locomotion, and normal body morphology. | Paper_evidence | WBPaper00004402 | |||||
WBPaper00004651 | |||||||||
WBPaper00006395 | |||||||||
WBPaper00025054 | |||||||||
WBPaper00026763 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 15 Nov 2007 00:00:00 | ||||||||
Automated_description | Involved in molting cycle. Predicted to be located in membrane. Expressed in vulA; vulB1; vulB2; vulC; and vulD. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C34G6.6a | |||||||
C34G6.6b | |||||||||
C34G6.6c | |||||||||
Corresponding_CDS_history | C34G6.6a:wp230 | ||||||||
C34G6.6b:wp185 | |||||||||
C34G6.6b:wp230 | |||||||||
Corresponding_transcript | C34G6.6a.1 | ||||||||
C34G6.6b.1 | |||||||||
C34G6.6c.1 | |||||||||
Other_sequence (46) | |||||||||
Associated_feature (30) | |||||||||
Experimental_info (7) | |||||||||
Map_info | Map | I | Position | 0.472301 | Error | 0.000165 | |||
Positive | Positive_clone | C34G6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00029429 | ||||||||
WBPaper00041497 | |||||||||
WBPaper00041771 | |||||||||
WBPaper00051259 | |||||||||
WBPaper00056673 | |||||||||
WBPaper00061203 | |||||||||
WBPaper00065319 | |||||||||
WBPaper00065707 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |