WormBase Tree Display for Gene: WBGene00016409
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WBGene00016409 | SMap | S_parent | Sequence | C34E10 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | sumv-1 | Person_evidence | WBPerson2627 | |||
Sequence_name | C34E10.8 | ||||||
Molecular_name | C34E10.8 | ||||||
C34E10.8.1 | |||||||
CE32158 | |||||||
Other_name | CELE_C34E10.8 | Accession_evidence | NDB | BX284603 | |||
Public_name | sumv-1 | ||||||
DB_info | Database | AceView | gene | 3G340 | |||
WormQTL | gene | WBGene00016409 | |||||
WormFlux | gene | WBGene00016409 | |||||
NDB | locus_tag | CELE_C34E10.8 | |||||
Panther | gene | CAEEL|WormBase=WBGene00016409|UniProtKB=P46582 | |||||
family | PTHR16198 | ||||||
NCBI | gene | 175720 | |||||
RefSeq | protein | NM_065715.5 | |||||
SwissProt | UniProtAcc | P46582 | |||||
UniProt_GCRP | UniProtAcc | P46582 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | sumv | ||||||
Allele (69) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00046565 | ||||||
00046566 | |||||||
00046567 | |||||||
00046568 | |||||||
00046569 | |||||||
00046570 | |||||||
00046571 | |||||||
00046572 | |||||||
00046573 | |||||||
00046574 | |||||||
Ortholog (21) | |||||||
Structured_description | Concise_description | sumv-1 encodes a protein with similarity to the KAT8 NLS2 non-enzymatic subunit of the mammalian KAT8/MOF histone acetyltransferase complex. | Paper_evidence | WBPaper00045315 | |||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 08 Jul 2014 00:00:00 | ||||||
Automated_description | Located in cytoplasm; neuron projection; and nucleus. Expressed in hypodermis and neurons. Is an ortholog of human INO80D (INO80 complex subunit D). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C34E10.8 | |||||
Corresponding_CDS_history | C34E10.8:wp88 | ||||||
Corresponding_transcript | C34E10.8.1 | ||||||
Other_sequence | ES739855.1 | ||||||
CR04508 | |||||||
CRC02127_1 | |||||||
HBC22931_1 | |||||||
Associated_feature | WBsf651040 | ||||||
WBsf992342 | |||||||
WBsf992343 | |||||||
WBsf992344 | |||||||
WBsf992345 | |||||||
WBsf1014859 | |||||||
WBsf1014860 | |||||||
WBsf226654 | |||||||
WBsf226655 | |||||||
Experimental_info (7) | |||||||
Map_info | Map | III | Position | -1.85641 | |||
Positive | Positive_clone | C34E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00027634 | ||||||
WBPaper00045315 | |||||||
WBPaper00048821 | |||||||
WBPaper00065308 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |