WormBase Tree Display for Gene: WBGene00016374
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WBGene00016374 | SMap | S_parent | Sequence | C33H5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | swd-2.2 | Person_evidence | WBPerson5509 | |||||
Sequence_name | C33H5.7 | ||||||||
Molecular_name | C33H5.7 | ||||||||
C33H5.7.1 | |||||||||
CE04150 | |||||||||
Other_name | CELE_C33H5.7 | Accession_evidence | NDB | BX284604 | |||||
Public_name | swd-2.2 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 10 Nov 2008 17:10:59 | WBPerson2970 | Name_change | CGC_name | swd-2.2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | swd | ||||||||
Allele (14) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00061062 | ||||||||
00061063 | |||||||||
00061064 | |||||||||
00061065 | |||||||||
00061066 | |||||||||
00061067 | |||||||||
00061068 | |||||||||
Contained_in_operon | CEOP4248 | ||||||||
Ortholog (46) | |||||||||
Paralog | WBGene00016373 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable chromatin binding activity. Involved in programmed cell death. Predicted to be located in nucleus. Predicted to be part of Set1C/COMPASS complex. Expressed in linker cell. Is an ortholog of human WDR82 (WD repeat domain 82). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C33H5.7 | |||||||
Corresponding_transcript | C33H5.7.1 | ||||||||
Other_sequence (36) | |||||||||
Associated_feature | WBsf646115 | ||||||||
WBsf228577 | |||||||||
WBsf228578 | |||||||||
WBsf228579 | |||||||||
Experimental_info | RNAi_result (19) | ||||||||
Expr_pattern | Expr13017 | ||||||||
Expr1013219 | |||||||||
Expr1037009 | |||||||||
Expr1145833 | |||||||||
Expr2017151 | |||||||||
Expr2035287 | |||||||||
Drives_construct | WBCnstr00028122 | ||||||||
WBCnstr00038154 | |||||||||
Construct_product | WBCnstr00028122 | ||||||||
Microarray_results (22) | |||||||||
Expression_cluster (108) | |||||||||
Interaction (67) | |||||||||
Map_info | Map | IV | Position | 3.47343 | Error | 0.000492 | |||
Positive | Positive_clone | C33H5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (11) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |