WormBase Tree Display for Gene: WBGene00016373
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| WBGene00016373 | SMap | S_parent | Sequence | C33H5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | swd-2.1 | Person_evidence | WBPerson5509 | |||||
| Sequence_name | C33H5.6 | ||||||||
| Molecular_name | C33H5.6 | ||||||||
| C33H5.6.1 | |||||||||
| CE46324 | |||||||||
| Other_name | wdr-82 | Paper_evidence | WBPaper00038372 | ||||||
| CELE_C33H5.6 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | swd-2.1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 10 Nov 2008 17:10:59 | WBPerson2970 | Name_change | CGC_name | swd-2.1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | swd | ||||||||
| Allele (18) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00061069 | ||||||||
| 00061070 | |||||||||
| 00061071 | |||||||||
| 00061072 | |||||||||
| 00061073 | |||||||||
| 00061074 | |||||||||
| Contained_in_operon | CEOP4248 | ||||||||
| Ortholog (40) | |||||||||
| Paralog | WBGene00016374 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable chromatin binding activity. Predicted to be involved in DNA-templated transcription termination. Predicted to be located in nucleus. Predicted to be part of Set1C/COMPASS complex. Is an ortholog of human WDR82 (WD repeat domain 82). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C33H5.6 | |||||||
| Corresponding_CDS_history | C33H5.6:wp227 | ||||||||
| Corresponding_transcript | C33H5.6.1 | ||||||||
| Other_sequence | CBC11271_1 | ||||||||
| CBC13532_1 | |||||||||
| CJC00376_1 | |||||||||
| CSC02099_1 | |||||||||
| CGC01107_1 | |||||||||
| FD517322.1 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00041818 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011570 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076190 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00106373 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029491 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062145 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011571 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017385 | ||||||||
| Expr1037008 | |||||||||
| Expr1145832 | |||||||||
| Expr2017150 | |||||||||
| Expr2035286 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (93) | |||||||||
| Interaction (17) | |||||||||
| Map_info | Map | IV | Position | 3.47458 | Error | 0.000474 | |||
| Positive | Positive_clone | C33H5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00032309 | ||||||||
| WBPaper00038372 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00040306 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065308 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
