WormBase Tree Display for Gene: WBGene00016328
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| WBGene00016328 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pde-5 | Person_evidence | WBPerson433 | |||||
| Sequence_name | C32E12.2 | ||||||||
| Molecular_name | C32E12.2 | ||||||||
| C32E12.2.1 | |||||||||
| CE45692 | |||||||||
| Other_name | CELE_C32E12.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | pde-5 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 10 Dec 2004 15:16:09 | WBPerson2970 | Name_change | CGC_name | pde-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pde | ||||||||
| Allele (37) | |||||||||
| Strain | WBStrain00032958 | ||||||||
| WBStrain00034936 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (22) | |||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00008443 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00011146 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00011433 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00020114 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022389 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable 3',5'-cyclic-GMP phosphodiesterase activity and cGMP-stimulated cyclic-nucleotide phosphodiesterase activity. Involved in several processes, including determination of adult lifespan; negative regulation of cGMP-mediated signaling; and response to alkaline pH. Expressed in AFDL and AFDR. Is an ortholog of human PDE10A (phosphodiesterase 10A). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | EFO:MONDO:0000211 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8772) | ||||
| Molecular_info | Corresponding_CDS | C32E12.2 | |||||||
| Corresponding_CDS_history | C32E12.2:wp170 | ||||||||
| C32E12.2:wp214 | |||||||||
| C32E12.2:wp221 | |||||||||
| Corresponding_transcript | C32E12.2.1 | ||||||||
| Other_sequence (14) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00003050 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00041678 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00072959 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029421 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr11359 | ||||||||
| Expr1023507 | |||||||||
| Expr1145701 | |||||||||
| Expr2014798 | |||||||||
| Expr2033032 | |||||||||
| Drives_construct | WBCnstr00018802 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (87) | |||||||||
| Interaction | WBInteraction000501265 | ||||||||
| WBInteraction000501274 | |||||||||
| WBInteraction000501275 | |||||||||
| WBInteraction000503997 | |||||||||
| WBInteraction000520542 | |||||||||
| Map_info | Map | I | Position | -0.283828 | Error | 0.003618 | |||
| Positive | Positive_clone | C32E12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (18) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
