WormBase Tree Display for Gene: WBGene00016239
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| WBGene00016239 | SMap | S_parent | Sequence | C30A5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | C30A5.4 | ||||||||
| Molecular_name | C30A5.4 | |||||||||
| Other_name | CELE_C30A5.4 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | C30A5.4 | |||||||||
| DB_info | Database | AceView | gene | 3J313 | ||||||
| WormQTL | gene | WBGene00016239 | ||||||||
| WormFlux | gene | WBGene00016239 | ||||||||
| NDB | locus_tag | CELE_C30A5.4 | ||||||||
| NCBI | gene | 183037 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 20 Jan 2020 12:17:44 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (15) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog (14) | ||||||||||
| Paralog (38) | ||||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalpapppa; ABaraapapaa; germ line; neurons; and pharyngeal cell based on RNA-seq; tiling array; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and age-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twelve chemicals including methylmercuric chloride; multi-walled carbon nanotube; and iron oxide nanoparticle based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | C30A5.4:wp275 | ||||||||
| Corresponding_pseudogene | C30A5.4 | |||||||||
| Other_sequence | Acan_isotig23266 | |||||||||
| CJC00131_1 | ||||||||||
| Dviv_isotig25078 | ||||||||||
| Oden_isotig27235 | ||||||||||
| Associated_feature | WBsf993272 | |||||||||
| WBsf225370 | ||||||||||
| Experimental_info | Expr_pattern | Expr1016225 | ||||||||
| Expr1145542 | ||||||||||
| Expr2001240 | ||||||||||
| Expr2019462 | ||||||||||
| Drives_construct | WBCnstr00028224 | |||||||||
| Construct_product | WBCnstr00028224 | |||||||||
| Microarray_results (20) | ||||||||||
| Expression_cluster (124) | ||||||||||
| Interaction | WBInteraction000228256 | |||||||||
| WBInteraction000242454 | ||||||||||
| WBInteraction000279637 | ||||||||||
| WBInteraction000297873 | ||||||||||
| WBInteraction000350825 | ||||||||||
| WBInteraction000407103 | ||||||||||
| WBInteraction000407104 | ||||||||||
| WBInteraction000413704 | ||||||||||
| WBInteraction000503095 | ||||||||||
| Map_info | Positive | Positive_clone | C30A5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | III | -0.358528 | ||||||||
| Method | Gene |
