WormBase Tree Display for Gene: WBGene00015988
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| WBGene00015988 | SMap | S_parent | Sequence | C18H2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | lido-18 | |||||||
| Sequence_name | C18H2.1 | ||||||||
| Molecular_name | C18H2.1 | ||||||||
| C18H2.1.1 | |||||||||
| CE54202 | |||||||||
| Other_name | CELE_C18H2.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | lido-18 | ||||||||
| DB_info | Database | AceView | gene | 3I755 | |||||
| WormQTL | gene | WBGene00015988 | |||||||
| WormFlux | gene | WBGene00015988 | |||||||
| NDB | locus_tag | CELE_C18H2.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015988|UniProtKB=Q18102 | |||||||
| family | PTHR22956 | ||||||||
| NCBI | gene | 176079 | |||||||
| RefSeq | protein | NM_001379800.2 | |||||||
| TREEFAM | TREEFAM_ID | TF315465 | |||||||
| TrEMBL | UniProtAcc | Q18102 | |||||||
| UniProt_GCRP | UniProtAcc | Q18102 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Nov 2018 16:28:50 | WBPerson1983 | Name_change | CGC_name | lido-18 | ||||
| 3 | 20 Jan 2020 14:55:51 | WBPerson4025 | Event | Split_into | WBGene00305979 | ||||
| 4 | 20 Jan 2020 14:56:16 | WBPerson4025 | Event | Split_into | WBGene00305980 | ||||
| Split_into | WBGene00305979 | ||||||||
| WBGene00305980 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lido | ||||||||
| Allele (64) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00060220 | ||||||||
| Ortholog (60) | |||||||||
| Paralog (20) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C18H2.1 | |||||||
| Corresponding_CDS_history | C18H2.1:wp168 | ||||||||
| C18H2.1:wp275 | |||||||||
| Corresponding_transcript | C18H2.1.1 | ||||||||
| Associated_feature (19) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00005164 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011025 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001227 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040977 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017978 | ||||||||
| Expr1145020 | |||||||||
| Expr2000993 | |||||||||
| Expr2019212 | |||||||||
| Drives_construct | WBCnstr00028403 | ||||||||
| Construct_product | WBCnstr00028403 | ||||||||
| Microarray_results | SMD_C18H2.1 | ||||||||
| GPL14144_C18H2.1_3497-3556_0.703_334_A | |||||||||
| GPL3518_CE29670 | |||||||||
| GPL9450_C18H2.1 | |||||||||
| cea2.p.57799 | |||||||||
| Expression_cluster (117) | |||||||||
| Interaction (16) | |||||||||
| Map_info | Map | III | Position | -0.643843 | |||||
| Positive | Positive_clone | C18H2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
