WormBase Tree Display for Gene: WBGene00015927
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| WBGene00015927 | SMap | S_parent | Sequence | C17H12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | dyci-1 | Person_evidence | WBPerson3088 | |||||
| Sequence_name | C17H12.1 | ||||||||
| Molecular_name | C17H12.1a | ||||||||
| C17H12.1a.1 | |||||||||
| CE16862 | |||||||||
| C17H12.1b | |||||||||
| CE52993 | |||||||||
| C17H12.1b.1 | |||||||||
| C17H12.1b.2 | |||||||||
| Other_name | CELE_C17H12.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | dyci-1 | ||||||||
| DB_info | Database | AceView | gene | 4H546 | |||||
| WormQTL | gene | WBGene00015927 | |||||||
| SignaLink | protein | WBGene00015927 | |||||||
| WormFlux | gene | WBGene00015927 | |||||||
| NDB | locus_tag | CELE_C17H12.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015927|UniProtKB=O45087 | |||||||
| family | PTHR12442 | ||||||||
| NCBI | gene | 177440 | |||||||
| RefSeq | protein | NM_001372852.3 | |||||||
| NM_001383110.2 | |||||||||
| TrEMBL | UniProtAcc | A0A486WV95 | |||||||
| O45087 | |||||||||
| UniProt_GCRP | UniProtAcc | O45087 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 01 Apr 2005 11:05:24 | WBPerson2970 | Name_change | CGC_name | dyci-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dyci | ||||||||
| Allele (63) | |||||||||
| Possibly_affected_by | WBVar02158493 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00003576 | ||||||||
| 00003577 | |||||||||
| 00003578 | |||||||||
| 00003579 | |||||||||
| 00033842 | |||||||||
| 00033843 | |||||||||
| Contained_in_operon | CEOP4675 | ||||||||
| Ortholog (48) | |||||||||
| Paralog | WBGene00016165 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | dyci-1 encodes a dynein intermediate chain; loss of dyci-1 activity via RNAi indicates that dyci-1 is essential during early embryogenesis for pronuclear migration and thus is required for embryonic development; RNAi experiments also indicate that dyci-1 is required for larval development, as well. | Paper_evidence | WBPaper00005654 | |||||
| WBPaper00006060 | |||||||||
| WBPaper00006395 | |||||||||
| WBPaper00025054 | |||||||||
| WBPaper00030897 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 15 Jan 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable dynein heavy chain binding activity and dynein light chain binding activity. Predicted to be involved in transport along microtubule. Predicted to be part of cytoplasmic dynein complex. Expressed in ciliated neurons. Is an ortholog of human DYNC1I1 (dynein cytoplasmic 1 intermediate chain 1) and DYNC1I2 (dynein cytoplasmic 1 intermediate chain 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C17H12.1a | |||||||
| C17H12.1b | |||||||||
| Corresponding_transcript | C17H12.1a.1 | ||||||||
| C17H12.1b.1 | |||||||||
| C17H12.1b.2 | |||||||||
| Other_sequence (35) | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result (29) | ||||||||
| Expr_pattern | Expr12315 | ||||||||
| Expr1023988 | |||||||||
| Expr1036810 | |||||||||
| Expr1144905 | |||||||||
| Expr2011126 | |||||||||
| Expr2029362 | |||||||||
| Drives_construct | WBCnstr00003646 | ||||||||
| WBCnstr00020990 | |||||||||
| WBCnstr00028448 | |||||||||
| Construct_product | WBCnstr00020272 | ||||||||
| WBCnstr00020990 | |||||||||
| WBCnstr00028448 | |||||||||
| Antibody | WBAntibody00002780 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (107) | |||||||||
| Interaction (72) | |||||||||
| Map_info | Map | IV | Position | 3.23192 | Error | 0.001327 | |||
| Positive | Positive_clone | C17H12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (14) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
