WormBase Tree Display for Gene: WBGene00015719
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| WBGene00015719 | SMap | S_parent | Sequence | C13A2 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | C13A2.2 | ||||||||
| Molecular_name | C13A2.2 | |||||||||
| Other_name | CELE_C13A2.2 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | C13A2.2 | |||||||||
| DB_info | Database | AceView | gene | 5H759 | ||||||
| WormQTL | gene | WBGene00015719 | ||||||||
| WormFlux | gene | WBGene00015719 | ||||||||
| NDB | locus_tag | CELE_C13A2.2 | ||||||||
| NCBI | gene | 182550 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 21 Sep 2017 13:54:48 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (32) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00088285 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | ||||||
| WBGene00135098 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | |||||||
| WBGene00079431 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||||
| WBGene00076227 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||||
| Paralog (27) | ||||||||||
| Structured_description | Automated_description | Enriched in muscle cell based on microarray studies. Is affected by several genes including daf-16; daf-12; and sir-2.1 based on tiling array; RNA-seq; and microarray studies. Is affected by tryptophan based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | C13A2.2:wp261 | ||||||||
| Corresponding_pseudogene | C13A2.2 | |||||||||
| Experimental_info | Expr_pattern | Expr1021335 | ||||||||
| Expr1144475 | ||||||||||
| Drives_construct | WBCnstr00028623 | |||||||||
| Construct_product | WBCnstr00028623 | |||||||||
| Microarray_results (11) | ||||||||||
| Expression_cluster (26) | ||||||||||
| Interaction (13) | ||||||||||
| Map_info | Positive | Positive_clone | C13A2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | V | 0.648005 | ||||||||
| Reference | WBPaper00065080 | |||||||||
| Method | Gene |
