WormBase Tree Display for Gene: WBGene00015550
expand all nodes | collapse all nodes | view schema
| WBGene00015550 | SMap | S_parent | Sequence | C06G3 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | C06G3.4 | ||||||||
| Molecular_name | C06G3.4 | |||||||||
| Other_name | CELE_C06G3.4 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | C06G3.4 | |||||||||
| DB_info | Database | AceView | gene | 4H793 | ||||||
| WormQTL | gene | WBGene00015550 | ||||||||
| WormFlux | gene | WBGene00015550 | ||||||||
| NDB | locus_tag | CELE_C06G3.4 | ||||||||
| NCBI | gene | 182342 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 17 Oct 2013 17:48:03 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (29) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00123452 | Caenorhabditis japonica | From_analysis | TreeFam | ||||||
| Inparanoid_8 | ||||||||||
| WBGene00133501 | Caenorhabditis japonica | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00120545 | Caenorhabditis japonica | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00126589 | Caenorhabditis japonica | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| Paralog (17) | ||||||||||
| Structured_description | Automated_description | Enriched in AVK based on RNA-seq studies. Is affected by several genes including eat-2; sir-2.1; and pgl-1 based on tiling array; RNA-seq; and microarray studies. Is affected by four chemicals including Rifampin; allantoin; and Sirolimus based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | C06G3.4:wp240 | ||||||||
| Corresponding_pseudogene | C06G3.4 | |||||||||
| Associated_feature | WBsf228491 | |||||||||
| Experimental_info | Expr_pattern | Expr1014404 | ||||||||
| Expr1144010 | ||||||||||
| Microarray_results (14) | ||||||||||
| Expression_cluster (30) | ||||||||||
| Interaction (154) | ||||||||||
| Map_info | Positive | Positive_clone | C06G3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | IV | 3.27777 | ||||||||
| Method | Gene |
