WormBase Tree Display for Gene: WBGene00015513
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WBGene00015513 | SMap | S_parent | Sequence | C06A8 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | snpc-1.1 | Person_evidence | WBPerson2290 | |||||
Sequence_name | C06A8.2 | ||||||||
Molecular_name | C06A8.2 | ||||||||
C06A8.2.1 | |||||||||
CE31292 | |||||||||
Other_name | CELE_C06A8.2 | Accession_evidence | NDB | BX284602 | |||||
Public_name | snpc-1.1 | ||||||||
DB_info | Database | AceView | gene | 2I70 | |||||
WormQTL | gene | WBGene00015513 | |||||||
WormFlux | gene | WBGene00015513 | |||||||
NDB | locus_tag | CELE_C06A8.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00015513|UniProtKB=Q17694 | |||||||
family | PTHR15131 | ||||||||
NCBI | gene | 174255 | |||||||
RefSeq | protein | NM_063235.6 | |||||||
TREEFAM | TREEFAM_ID | TF324445 | |||||||
TrEMBL | UniProtAcc | Q17694 | |||||||
UniProt_GCRP | UniProtAcc | Q17694 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 04 Jul 2013 14:01:25 | WBPerson2970 | Name_change | CGC_name | snpc-1.1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | snpc | ||||||||
Allele (21) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00058927 | ||||||||
00058928 | |||||||||
00058929 | |||||||||
00058930 | |||||||||
Contained_in_operon | CEOP2731 | ||||||||
Ortholog (29) | |||||||||
Paralog | WBGene00012715 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00019894 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00017265 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable sequence-specific DNA binding activity. Predicted to be involved in snRNA transcription by RNA polymerase II and snRNA transcription by RNA polymerase III. Predicted to be part of snRNA-activating protein complex. Is an ortholog of human SNAPC1 (small nuclear RNA activating complex polypeptide 1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C06A8.2 | |||||||
Corresponding_CDS_history | C06A8.2:wp81 | ||||||||
Corresponding_transcript | C06A8.2.1 | ||||||||
Other_sequence (3) | |||||||||
Associated_feature | WBsf650272 | ||||||||
WBsf665733 | |||||||||
WBsf223398 | |||||||||
Experimental_info | RNAi_result | WBRNAi00008350 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00113059 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00113288 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00039834 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00091002 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00024483 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00072901 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00113561 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00028543 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00072902 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1015169 | ||||||||
Expr1036640 | |||||||||
Expr1143915 | |||||||||
Expr2015956 | |||||||||
Expr2034191 | |||||||||
Drives_construct | WBCnstr00028789 | ||||||||
Construct_product | WBCnstr00028789 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (108) | |||||||||
Interaction (83) | |||||||||
Map_info (3) | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
WBPaper00062604 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |