WormBase Tree Display for Gene: WBGene00015505
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| WBGene00015505 | SMap | S_parent | Sequence | C06A5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C06A5.8 | |||||||
| Molecular_name | C06A5.8a | ||||||||
| C06A5.8a.1 | |||||||||
| CE07955 | |||||||||
| C06A5.8b | |||||||||
| CE33360 | |||||||||
| C06A5.8b.1 | |||||||||
| C06A5.8b.2 | |||||||||
| Other_name | CELE_C06A5.8 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | C06A5.8 | ||||||||
| DB_info | Database | AceView | gene | 1G584 | |||||
| WormQTL | gene | WBGene00015505 | |||||||
| WormFlux | gene | WBGene00015505 | |||||||
| NDB | locus_tag | CELE_C06A5.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015505|UniProtKB=O01481 | |||||||
| family | PTHR22791 | ||||||||
| NCBI | gene | 172276 | |||||||
| RefSeq | protein | NM_059336.6 | |||||||
| NM_001392389.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF322757 | |||||||
| TrEMBL | UniProtAcc | Q86ND0 | |||||||
| O01481 | |||||||||
| UniProt_GCRP | UniProtAcc | O01481 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (14) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00024732 | ||||||||
| 00024733 | |||||||||
| 00024734 | |||||||||
| 00024735 | |||||||||
| 00024736 | |||||||||
| 00121397 | |||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00004380 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in protein ubiquitination. Expressed in germ line and oocyte. Is an ortholog of human RNF227 (ring finger protein 227). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C06A5.8a | |||||||
| C06A5.8b | |||||||||
| Corresponding_transcript | C06A5.8a.1 | ||||||||
| C06A5.8b.1 | |||||||||
| C06A5.8b.2 | |||||||||
| Other_sequence | MI06591 | ||||||||
| MC04174 | |||||||||
| CJC06485_1 | |||||||||
| Associated_feature | WBsf649208 | ||||||||
| WBsf664310 | |||||||||
| WBsf983818 | |||||||||
| WBsf219520 | |||||||||
| WBsf219521 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00039826 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00061727 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076089 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00002914 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007436 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00094731 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039825 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028536 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9711 | ||||||||
| Expr1013090 | |||||||||
| Expr1036634 | |||||||||
| Expr1143907 | |||||||||
| Expr2000501 | |||||||||
| Expr2018726 | |||||||||
| Drives_construct | WBCnstr00028796 | ||||||||
| Construct_product | WBCnstr00028796 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (131) | |||||||||
| Interaction (125) | |||||||||
| Map_info | Positive | Positive_clone | C06A5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 0.667517 | |||||||
| Method | Gene |
