WormBase Tree Display for Gene: WBGene00015406
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| WBGene00015406 | SMap | S_parent | Sequence | C03H5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C03H5.4 | |||||||
| Molecular_name | C03H5.4a | ||||||||
| C03H5.4a.1 | |||||||||
| CE07897 | |||||||||
| C03H5.4b | |||||||||
| Other_name | CELE_C03H5.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | C03H5.4 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (16) | |||||||||
| Strain | WBStrain00055361 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (23) | |||||||||
| Paralog | WBGene00007419 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00045002 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| WBGene00044468 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Concise_description | C03H5.4 encodes a secreted phospholipase A2; based on similarity to mammalian enzymes, the product of C03H5.4 is predicted to function in phospholipid hydrolysis during fat digestion and/or host response to bacterial infection. | Paper_evidence | WBPaper00032311 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 11 Nov 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable calcium ion binding activity and phospholipase A2 activity. Predicted to be involved in arachidonic acid secretion; lipid catabolic process; and phospholipid metabolic process. Predicted to be located in extracellular region. Human ortholog(s) of this gene implicated in several diseases, including adult respiratory distress syndrome; cholecystolithiasis; and familial benign fleck retina. Is an ortholog of human PLA2G2A (phospholipase A2 group IIA); PLA2G2E (phospholipase A2 group IIE); and PLA2G5 (phospholipase A2 group V). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:9256 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9031) | ||||
| DOID:0111677 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9038) | ||||||
| DOID:11151 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9031) | ||||||
| DOID:8534 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9031) | ||||||
| DOID:1596 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9031) | ||||||
| DOID:11394 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9031) | ||||||
| DOID:526 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9031) | ||||||
| DOID:11204 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9031) | ||||||
| Molecular_info | Corresponding_CDS | C03H5.4a | |||||||
| Corresponding_CDS_history | C03H5.4:wp221 | ||||||||
| Corresponding_transcript | C03H5.4b | ||||||||
| C03H5.4a.1 | |||||||||
| Other_sequence (14) | |||||||||
| Associated_feature | WBsf986393 | ||||||||
| WBsf986394 | |||||||||
| WBsf986395 | |||||||||
| WBsf1011381 | |||||||||
| WBsf1011382 | |||||||||
| WBsf1011383 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00102654 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00039561 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00102883 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010085 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028406 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018059 | ||||||||
| Expr1143663 | |||||||||
| Expr2000382 | |||||||||
| Expr2018605 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (31) | |||||||||
| Interaction (45) | |||||||||
| Map_info | Positive | Positive_clone | C03H5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -15.6165 | |||||||
| Reference | WBPaper00026800 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
