WormBase Tree Display for Gene: WBGene00015321
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| WBGene00015321 | SMap | S_parent | Sequence | C02B8 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | fbxc-38 | Person_evidence | WBPerson655 | ||||||
| Sequence_name | C02B8.2 | |||||||||
| Molecular_name | C02B8.2 | |||||||||
| Other_name | CELE_C02B8.2 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | fbxc-38 | |||||||||
| DB_info | Database | AceView | gene | XI761 | ||||||
| WormQTL | gene | WBGene00015321 | ||||||||
| WormFlux | gene | WBGene00015321 | ||||||||
| NDB | locus_tag | CELE_C02B8.2 | ||||||||
| NCBI | gene | 182103 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 17 Jun 2008 14:44:53 | WBPerson2970 | Name_change | CGC_name | fbxc-38 | |||||
| 3 | 20 May 2019 14:54:01 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | fbxc | |||||||||
| Allele (21) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00071167 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| Paralog (49) | ||||||||||
| Structured_description | Automated_description | Enriched in marginal cell based on single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and pgl-1 based on microarray; tiling array; and RNA-seq studies. Is affected by hydrogen sulfide; Tunicamycin; and indole based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | C02B8.2:wp222 | ||||||||
| C02B8.2:wp271 | ||||||||||
| Corresponding_pseudogene | C02B8.2 | |||||||||
| Experimental_info | Expr_pattern | Expr1025400 | ||||||||
| Expr1143513 | ||||||||||
| Expr2011723 | ||||||||||
| Expr2029962 | ||||||||||
| Drives_construct | WBCnstr00028937 | |||||||||
| Construct_product | WBCnstr00028937 | |||||||||
| Microarray_results | SMD_C02B8.2 | |||||||||
| 187168_s_at | ||||||||||
| A_12_P135355 | ||||||||||
| Aff_C02B8.2 | ||||||||||
| GPL14144_C02B8.2_440-499_0.946_1_A | ||||||||||
| GPL3518_CE03891 | ||||||||||
| GPL8304_CE_WBGene00015321_A | ||||||||||
| GPL8673_C02B8_2P00258 | ||||||||||
| GPL8673_C02B8_2P00449 | ||||||||||
| GPL8673_C02B8_2P00475 | ||||||||||
| Expression_cluster (44) | ||||||||||
| Interaction (82) | ||||||||||
| Map_info | Map | X | Position | -0.504703 | Error | 0.010724 | ||||
| Positive | Positive_clone | C02B8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
