WormBase Tree Display for Gene: WBGene00015316
expand all nodes | collapse all nodes | view schema
| WBGene00015316 | SMap | S_parent | Sequence | C02A12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | srbc-30 | Person_evidence | WBPerson522 | |||||
| Sequence_name | C02A12.3 | ||||||||
| Molecular_name | C02A12.3 | ||||||||
| C02A12.3.1 | |||||||||
| CE38024 | |||||||||
| Other_name | CELE_C02A12.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srbc-30 | ||||||||
| DB_info | Database | AceView | gene | 5D954 | |||||
| WormQTL | gene | WBGene00015316 | |||||||
| WormFlux | gene | WBGene00015316 | |||||||
| NDB | locus_tag | CELE_C02A12.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015316|UniProtKB=Q5F4V6 | |||||||
| family | PTHR10664 | ||||||||
| NCBI | gene | 182096 | |||||||
| RefSeq | protein | NM_071569.2 | |||||||
| TREEFAM | TREEFAM_ID | TF315371 | |||||||
| TrEMBL | UniProtAcc | Q5F4V6 | |||||||
| UniProt_GCRP | UniProtAcc | Q5F4V6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 03 Feb 2005 11:21:21 | WBPerson1843 | Name_change | CGC_name | srbc-30 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srbc | ||||||||
| Allele (61) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00081311 | ||||||||
| Ortholog (43) | |||||||||
| Paralog (124) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C02A12.3 | |||||||
| Corresponding_CDS_history | C02A12.3:wp138 | ||||||||
| Corresponding_transcript | C02A12.3.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00009963 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1022040 | ||||||||
| Expr1143496 | |||||||||
| Drives_construct | WBCnstr00028941 | ||||||||
| Construct_product | WBCnstr00028941 | ||||||||
| Microarray_results | SMD_C02A12.7 | ||||||||
| A_12_P134805 | |||||||||
| A_12_P134806 | |||||||||
| GPL14144_C02A12.3_821-880_0.819_34_A | |||||||||
| GPL19516_CGZ0001852 | |||||||||
| GPL21109_C02A12.3 | |||||||||
| GPL8304_CE_WBGene00015316_A | |||||||||
| GPL8673_C02A12_3P00005 | |||||||||
| GPL8673_C02A12_3P00276 | |||||||||
| GPL8673_C02A12_3P00456 | |||||||||
| Expression_cluster | WBPaper00037950:dopaminergic-neurons_L1-larva_expressed | ||||||||
| WBPaper00037950:intestine_L2-larva_expressed | |||||||||
| WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray | |||||||||
| WBPaper00045217:prg-1_progressively_regulated | |||||||||
| WBPaper00045420:fertilization_downregulated_transcript | |||||||||
| WBPaper00045774:clk-1_downregulated | |||||||||
| WBPaper00045974:NSM_enriched_totalRNA_tiling | |||||||||
| WBPaper00061753:csr-1(tor159)_upregulated_25C | |||||||||
| Interaction (34) | |||||||||
| Map_info | Map | V | Position | -10.9975 | Error | 0.04623 | |||
| Positive | Positive_clone | C02A12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
