WormBase Tree Display for Gene: WBGene00015228
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| WBGene00015228 | SMap | S_parent | Sequence | B0511 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | B0511.2 | ||||||||
| Molecular_name | B0511.2 | |||||||||
| Other_name | CELE_B0511.2 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | B0511.2 | |||||||||
| DB_info | Database | AceView | gene | 1L227 | ||||||
| WormQTL | gene | WBGene00015228 | ||||||||
| WormFlux | gene | WBGene00015228 | ||||||||
| NDB | locus_tag | CELE_B0511.2 | ||||||||
| NCBI | gene | 182015 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 26 Sep 2019 11:16:07 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele | WBVar01622900 | |||||||||
| WBVar01499739 | ||||||||||
| WBVar01499049 | ||||||||||
| WBVar01499054 | ||||||||||
| WBVar00344344 | ||||||||||
| WBVar00344345 | ||||||||||
| WBVar00667912 | ||||||||||
| WBVar01498959 | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Paralog | WBGene00044053 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| WBGene00164983 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||||||
| WBGene00021055 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Structured_description | Automated_description | Enriched in several structures, including germ line; head motor neurons; intestine; mechanosensory neurons; and pharyngeal muscle cell based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; sir-2.1; and clk-1 based on microarray; RNA-seq; and proteomic studies. Is affected by Doxycycline; resveratrol; and Sirolimus based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | B0511.2:wp227 | ||||||||
| B0511.2:wp273 | ||||||||||
| Corresponding_pseudogene | B0511.2 | |||||||||
| Experimental_info | Expr_pattern | Expr1011262 | ||||||||
| Expr1143300 | ||||||||||
| Expr2000229 | ||||||||||
| Expr2018449 | ||||||||||
| Microarray_results | SMD_B0511.2 | |||||||||
| 182369_at | ||||||||||
| A_12_P113252 | ||||||||||
| Aff_B0511.2 | ||||||||||
| GPL14144_B0511.2_1131-1190_0.952_1_A | ||||||||||
| GPL19516_CGZ0007860 | ||||||||||
| GPL21109_C36A4.12 | ||||||||||
| GPL3518_CE17341 | ||||||||||
| GPL8304_CE_WBGene00015228_A | ||||||||||
| GPL8304_CE_WBGene00015228_B | ||||||||||
| Expression_cluster (75) | ||||||||||
| Interaction (14) | ||||||||||
| Map_info | Positive | Positive_clone | B0511 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | I | 5.06012 | ||||||||
| Reference | WBPaper00065080 | |||||||||
| Method | Gene |
