WormBase Tree Display for Gene: WBGene00015117
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| WBGene00015117 | SMap | S_parent | Sequence | B0294 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | B0294.1 | |||||||
| Molecular_name | B0294.1 | ||||||||
| B0294.1.1 | |||||||||
| CE19656 | |||||||||
| Other_name | CELE_B0294.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | B0294.1 | ||||||||
| DB_info | Database | AceView | gene | XC512 | |||||
| WormQTL | gene | WBGene00015117 | |||||||
| WormFlux | gene | WBGene00015117 | |||||||
| NDB | locus_tag | CELE_B0294.1 | |||||||
| NCBI | gene | 181908 | |||||||
| RefSeq | protein | NM_075947.2 | |||||||
| TREEFAM | TREEFAM_ID | TF322584 | |||||||
| TrEMBL | UniProtAcc | Q9TXP8 | |||||||
| UniProt_GCRP | UniProtAcc | Q9TXP8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (23) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00034679 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| Inparanoid_8 | |||||||||
| WBGene00034943 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| Inparanoid_8 | |||||||||
| WBGene00042740 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00084458 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| WBGene00084477 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| WBGene00084431 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| chrX_pilon.g18522 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00010253 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00015708 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015707 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015706 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalppppaa; ABalppppppa; AVE; amphid neurons; and head mesodermal cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by eleven chemicals including 1-methylnicotinamide; Psoralens; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0294.1 | |||||||
| Corresponding_transcript | B0294.1.1 | ||||||||
| Associated_feature | WBsf1004177 | ||||||||
| WBsf1022368 | |||||||||
| WBsf1022369 | |||||||||
| WBsf237038 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00038887 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00028068 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009675 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020040 | ||||||||
| Expr1143074 | |||||||||
| Expr2000125 | |||||||||
| Expr2018341 | |||||||||
| Drives_construct | WBCnstr00029073 | ||||||||
| Construct_product | WBCnstr00029073 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (162) | |||||||||
| Interaction | WBInteraction000229120 | ||||||||
| WBInteraction000335392 | |||||||||
| WBInteraction000337830 | |||||||||
| Map_info | Positive | Positive_clone | B0294 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -17.3701 | |||||||
| Method | Gene |
