WormBase Tree Display for Gene: WBGene00015708
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| WBGene00015708 | SMap | S_parent | Sequence | C12D5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C12D5.5 | |||||||
| Molecular_name | C12D5.5 | ||||||||
| C12D5.5.1 | |||||||||
| CE06807 | |||||||||
| Other_name | CELE_C12D5.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | C12D5.5 | ||||||||
| DB_info | Database | AceView | gene | 5I147 | |||||
| WormQTL | gene | WBGene00015708 | |||||||
| WormFlux | gene | WBGene00015708 | |||||||
| NDB | locus_tag | CELE_C12D5.5 | |||||||
| NCBI | gene | 182536 | |||||||
| RefSeq | protein | NM_072583.4 | |||||||
| TREEFAM | TREEFAM_ID | TF322584 | |||||||
| TrEMBL | UniProtAcc | Q17924 | |||||||
| UniProt_GCRP | UniProtAcc | Q17924 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (35) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00034679 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| Inparanoid_8 | |||||||||
| WBGene00034943 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| Inparanoid_8 | |||||||||
| WBGene00042740 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00084458 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| WBGene00084477 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| WBGene00084431 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| chrV_pilon.g14786 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00010253 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00015117 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015706 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| WBGene00015707 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; clk-1; and aak-2 based on RNA-seq and microarray studies. Is affected by seven chemicals including Mercuric Chloride; Rifampin; and allantoin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C12D5.5 | |||||||
| Corresponding_transcript | C12D5.5.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00040387 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00028823 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010645 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024937 | ||||||||
| Expr1144447 | |||||||||
| Expr2000722 | |||||||||
| Expr2018944 | |||||||||
| Drives_construct | WBCnstr00028633 | ||||||||
| Construct_product | WBCnstr00028633 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (73) | |||||||||
| Map_info | Positive | Positive_clone | C12D5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 0.826604 | |||||||
| Method | Gene |
