WormBase Tree Display for Gene: WBGene00014019
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WBGene00014019 | SMap | S_parent | Sequence | ZK632 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | ZK632.12 | |||||||
Molecular_name | ZK632.12 | ||||||||
ZK632.12.1 | |||||||||
CE01110 | |||||||||
Other_name | CELE_ZK632.12 | Accession_evidence | NDB | BX284603 | |||||
Public_name | ZK632.12 | ||||||||
DB_info | Database | AceView | gene | 3K921 | |||||
WormQTL | gene | WBGene00014019 | |||||||
WormFlux | gene | WBGene00014019 | |||||||
NDB | locus_tag | CELE_ZK632.12 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00014019|UniProtKB=P34657 | |||||||
family | PTHR46280 | ||||||||
NCBI | gene | 176397 | |||||||
RefSeq | protein | NM_066782.8 | |||||||
SwissProt | UniProtAcc | P34657 | |||||||
TREEFAM | TREEFAM_ID | TF315235 | |||||||
UniProt_GCRP | UniProtAcc | P34657 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (15) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00043788 | ||||||||
00043789 | |||||||||
00043790 | |||||||||
00043791 | |||||||||
00043792 | |||||||||
00043793 | |||||||||
00043794 | |||||||||
00043795 | |||||||||
00120755 | |||||||||
Contained_in_operon | CEOP3640 | ||||||||
Ortholog (37) | |||||||||
Paralog | WBGene00000101 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
WBGene00003084 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Concise_description | ZK632.12 encodes one of 12 C. elegans FYVE-domain containing proteins and is orthologous to mammalian Phafin2; as loss of ZK632.12 activity via RNAi screens results in no obvious defects, the precise role of ZK632.12 in C. elegans development and/or behavior is not yet known. | Paper_evidence | WBPaper00028279 | |||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 16 Mar 2007 00:00:00 | ||||||||
Automated_description | Predicted to enable phosphatidylinositol-3-phosphate binding activity. Predicted to be involved in endosome organization and endosome to lysosome transport. Predicted to be located in early endosome. Expressed in intestine; pharynx; and reproductive system. Is an ortholog of human PLEKHF2 (pleckstrin homology and FYVE domain containing 2). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | ZK632.12 | |||||||
Corresponding_transcript | ZK632.12.1 | ||||||||
Other_sequence (36) | |||||||||
Associated_feature | WBsf225637 | ||||||||
WBsf225638 | |||||||||
Experimental_info | RNAi_result | WBRNAi00087644 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00059568 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00098079 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00038372 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00022088 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00001104 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00006062 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00078212 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00062493 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram1871 | ||||||||
Expr7228 | |||||||||
Expr1012687 | |||||||||
Expr1036269 | |||||||||
Expr1162985 | |||||||||
Expr2008898 | |||||||||
Expr2027132 | |||||||||
Drives_construct | WBCnstr00003588 | ||||||||
WBCnstr00029374 | |||||||||
Construct_product | WBCnstr00029374 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (96) | |||||||||
Interaction (57) | |||||||||
Map_info | Positive | Positive_clone | ZK632 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | III | 1.12433 | |||||||
Reference | WBPaper00028279 | ||||||||
WBPaper00031805 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Method | Gene |