WormBase Tree Display for Gene: WBGene00013979
expand all nodes | collapse all nodes | view schema
| WBGene00013979 | SMap | S_parent | Sequence | ZK507 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | ZK507.3 | ||||||||
| Molecular_name | ZK507.3 | |||||||||
| Other_name | CELE_ZK507.3 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | ZK507.3 | |||||||||
| DB_info | Database | AceView | gene | 3K189 | ||||||
| WormQTL | gene | WBGene00013979 | ||||||||
| SignaLink | protein | WBGene00013979 | ||||||||
| WormFlux | gene | WBGene00013979 | ||||||||
| NDB | locus_tag | CELE_ZK507.3 | ||||||||
| NCBI | gene | 191337 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 20 Jan 2020 12:17:17 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (19) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00054854 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| TreeFam | ||||||||||
| Inparanoid_8 | ||||||||||
| WBGene00029119 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||||
| OMA | ||||||||||
| Inparanoid_8 | ||||||||||
| WBGene00154516 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00137703 | Caenorhabditis japonica | From_analysis | OMA | |||||||
| TreeFam | ||||||||||
| Inparanoid_8 | ||||||||||
| Paralog (91) | ||||||||||
| Structured_description | Automated_description | Enriched in male based on RNA-seq studies. Is affected by several genes including daf-2; dpy-10; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by eleven chemicals including methylmercuric chloride; manganese chloride; and D-glucose based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | ZK507.3:wp100 | ||||||||
| ZK507.3:wp275 | ||||||||||
| Corresponding_pseudogene | ZK507.3 | |||||||||
| Other_sequence | CR04455 | |||||||||
| CRC00393_1 | ||||||||||
| JO472936.1 | ||||||||||
| JI168095.1 | ||||||||||
| Associated_feature | WBsf993571 | |||||||||
| WBsf225518 | ||||||||||
| Experimental_info | Expr_pattern | Expr1162888 | ||||||||
| Expr2008857 | ||||||||||
| Expr2027090 | ||||||||||
| Drives_construct | WBCnstr00029399 | |||||||||
| Construct_product | WBCnstr00029399 | |||||||||
| Microarray_results (17) | ||||||||||
| Expression_cluster (107) | ||||||||||
| Map_info | Positive | Positive_clone | ZK507 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | III | 0.164292 | ||||||||
| Reference | WBPaper00027258 | |||||||||
| Method | Gene |
