WormBase Tree Display for Gene: WBGene00013920
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WBGene00013920 | SMap | S_parent | Sequence | ZC506 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | pssy-1 | Person_evidence | WBPerson1105 | |||
Sequence_name | ZC506.3 | ||||||
Molecular_name | ZC506.3 | ||||||
ZC506.3.1 | |||||||
CE01681 | |||||||
ZC506.3.2 | |||||||
Other_name | CELE_ZC506.3 | Accession_evidence | NDB | BX284606 | |||
Public_name | pssy-1 | ||||||
DB_info | Database (13) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | pssy | ||||||
Allele (53) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (15) | |||||||
Contained_in_operon | CEOPX107 | ||||||
Ortholog (35) | |||||||
Paralog | WBGene00012095 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00012897 | Caenorhabditis elegans | From_analysis | Panther | ||||
Structured_description | Concise_description | pssy-1 encodes a phosphatidylserine (PS) synthase; by homology, PSSY-1 is predicted to function in the biosynthesis of phosphatidylserine; loss of pssy-1 function suppresses endocytic recyling defects in animals containing a mutation in tat-1, a P4-ATPase that functions to transport phosphatidylserine and in animals overexpressing NUM-1A, an isoform of the C. elegans Numb ortholog. | Paper_evidence | WBPaper00040189 | |||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 14 Oct 2011 00:00:00 | ||||||
Automated_description | Predicted to enable L-serine-phosphatidylethanolamine phosphatidyltransferase activity. Predicted to be involved in phosphatidylserine biosynthetic process. Predicted to be located in endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in Lenz-Majewski hyperostotic dwarfism. Is an ortholog of human PTDSS1 (phosphatidylserine synthase 1). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed (2) | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0111507 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9587) | ||
Molecular_info | Corresponding_CDS | ZC506.3 | |||||
Corresponding_transcript | ZC506.3.1 | ||||||
ZC506.3.2 | |||||||
Other_sequence (26) | |||||||
Associated_feature | WBsf648437 | ||||||
WBsf663213 | |||||||
WBsf1006580 | |||||||
WBsf236223 | |||||||
WBsf236224 | |||||||
WBsf236225 | |||||||
WBsf236226 | |||||||
Experimental_info | RNAi_result | WBRNAi00058984 | Inferred_automatically | RNAi_primary | |||
WBRNAi00087512 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00001747 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00038086 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram2083 | ||||||
Expr7173 | |||||||
Expr1024311 | |||||||
Expr1036228 | |||||||
Expr1162417 | |||||||
Expr2015137 | |||||||
Expr2033375 | |||||||
Drives_construct | WBCnstr00003699 | ||||||
WBCnstr00029444 | |||||||
Construct_product | WBCnstr00029444 | ||||||
Microarray_results (22) | |||||||
Expression_cluster (107) | |||||||
Interaction | WBInteraction000286504 | ||||||
WBInteraction000287546 | |||||||
WBInteraction000308997 | |||||||
WBInteraction000317134 | |||||||
WBInteraction000378737 | |||||||
WBInteraction000389768 | |||||||
Map_info | Map | X | Position | 1.73168 | |||
Positive | Positive_clone | ZC506 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00040189 | |||||||
WBPaper00042257 | |||||||
WBPaper00055090 | |||||||
WBPaper00060347 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |