WormBase Tree Display for Gene: WBGene00013744
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| WBGene00013744 | SMap | S_parent | Sequence | Y111B2A | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | Y111B2A.27 | ||||||||
| Molecular_name | Y111B2A.27 | |||||||||
| Other_name | Y111B2A.h | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | |||||||||
| CELE_Y111B2A.27 | Accession_evidence | NDB | BX284603 | |||||||
| Public_name | Y111B2A.27 | |||||||||
| DB_info | Database | AceView | gene | 3N626 | ||||||
| WormQTL | gene | WBGene00013744 | ||||||||
| WormFlux | gene | WBGene00013744 | ||||||||
| NDB | locus_tag | CELE_Y111B2A.27 | ||||||||
| NCBI | gene | 3565325 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 20 Jan 2020 12:17:04 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (53) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00156146 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| Paralog | WBGene00010719 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Structured_description | Automated_description | Enriched in Z1.p; Z4.a; gon_male_dtc anterior; and gon_male_dtc posterior based on RNA-seq studies. Is affected by several genes including daf-2; eat-2; and clk-1 based on microarray and RNA-seq studies. Is affected by six chemicals including methylmercuric chloride; Rifampin; and allantoin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | Y111B2A.27:wp275 | ||||||||
| Corresponding_pseudogene | Y111B2A.27 | |||||||||
| Other_sequence | Oden_isotig20167 | |||||||||
| CJC04142_1 | ||||||||||
| CR05393 | ||||||||||
| CRC10083_1 | ||||||||||
| CBC06447_1 | ||||||||||
| Experimental_info | Expr_pattern | Expr1024692 | ||||||||
| Expr1036161 | ||||||||||
| Expr1158887 | ||||||||||
| Expr2025248 | ||||||||||
| Microarray_results | SMD_Y111B2C.F | |||||||||
| A_12_P112613 | ||||||||||
| GPL14144_Y111B2A.27_545-604_0.922_1_A | ||||||||||
| GPL19516_CGZ0042226 | ||||||||||
| GPL21109_Y111B2A.27 | ||||||||||
| GPL8304_CE_WBGene00013744_A | ||||||||||
| GPL8673_Y111B2A_27P00599 | ||||||||||
| GPL8673_Y111B2A_27P00615 | ||||||||||
| Expression_cluster (47) | ||||||||||
| Map_info | Positive | Positive_clone | Y111B2A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | III | 17.9786 | ||||||||
| Method | Gene |
