WormBase Tree Display for Gene: WBGene00013647
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WBGene00013647 | SMap | S_parent | Sequence | Y105C5B | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y105C5B.5 | |||||||
Molecular_name | Y105C5B.5a | ||||||||
Y105C5B.5a.1 | |||||||||
CE24081 | |||||||||
Y105C5B.5b | |||||||||
Other_name | CELE_Y105C5B.5 | Accession_evidence | NDB | BX284604 | |||||
Public_name | Y105C5B.5 | ||||||||
DB_info | Database | AceView | gene | 4Q658 | |||||
WormQTL | gene | WBGene00013647 | |||||||
WormFlux | gene | WBGene00013647 | |||||||
NDB | locus_tag | CELE_Y105C5B.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00013647|UniProtKB=Q9U315 | |||||||
family | PTHR31664 | ||||||||
NCBI | gene | 190888 | |||||||
RefSeq | protein | NR_131663.1 | |||||||
NM_070493.9 | |||||||||
TrEMBL | UniProtAcc | Q9U315 | |||||||
UniProt_GCRP | UniProtAcc | Q9U315 | |||||||
RNAcentral | URSid | URS00007AD946 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (37) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (40) | |||||||||
Paralog (8) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including anterior arcade cell; anterior hypodermis; dorsal uterine cell; excretory system; and neuronal sheath cell based on tiling array and single-cell RNA-seq studies. Is affected by several genes including nuo-6; atm-1; and atfs-1 based on RNA-seq; proteomic; tiling array; and microarray studies. Is affected by twenty-two chemicals including methylmercuric chloride; rotenone; and manganese chloride based on microarray; RNA-seq; and proteomic studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF4440; Domain of unknown function (DUF4440); and NTF2-like domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y105C5B.5a | |||||||
Corresponding_transcript | Y105C5B.5b | ||||||||
Y105C5B.5a.1 | |||||||||
Other_sequence (17) | |||||||||
Associated_feature | WBsf998794 | ||||||||
WBsf1018817 | |||||||||
WBsf231257 | |||||||||
Experimental_info | RNAi_result | WBRNAi00036480 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00055207 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1025053 | ||||||||
Expr1158743 | |||||||||
Expr2006961 | |||||||||
Expr2025183 | |||||||||
Microarray_results (17) | |||||||||
Expression_cluster (212) | |||||||||
Interaction | WBInteraction000549438 | ||||||||
WBInteraction000549448 | |||||||||
WBInteraction000550255 | |||||||||
WBInteraction000551781 | |||||||||
WBInteraction000577993 | |||||||||
Map_info | Positive | Positive_clone | Y105C5B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 14.4556 | |||||||
Method | Gene |