WormBase Tree Display for Gene: WBGene00013416
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| WBGene00013416 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | Y64G10A.7 | |||||||
| Molecular_name (15) | |||||||||
| Other_name | CELE_Y64G10A.7 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | Y64G10A.7 | ||||||||
| DB_info | Database | AceView | gene | 4P83 | |||||
| WormQTL | gene | WBGene00013416 | |||||||
| WormFlux | gene | WBGene00013416 | |||||||
| NDB | locus_tag | CELE_Y64G10A.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013416|UniProtKB=G5EFX3 | |||||||
| family | PTHR24035 | ||||||||
| NCBI | gene | 178377 | |||||||
| RefSeq | protein | NM_001268873.3 | |||||||
| NM_001307151.3 | |||||||||
| NM_001307152.3 | |||||||||
| NM_001307007.3 | |||||||||
| NM_001268874.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF332598 | |||||||
| TrEMBL | UniProtAcc | G5ECL0 | |||||||
| G5EFX3 | |||||||||
| A0A061AKU0 | |||||||||
| N1NTK8 | |||||||||
| N1NVB8 | |||||||||
| UniProt_GCRP | UniProtAcc | G5EFX3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 06 Mar 2009 10:47:43 | WBPerson4025 | Event | Acquires_merge | WBGene00045173 | ||||
| Acquires_merge | WBGene00045173 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (416) | |||||||||
| Strain | WBStrain00031795 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00000389 | ||||||||
| 00000390 | |||||||||
| 00120275 | |||||||||
| 00120276 | |||||||||
| Ortholog (48) | |||||||||
| Paralog | WBGene00000415 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00011723 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00020806 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | The Y64G10A.7 gene encodes a homolog of the human gene FIBRILLIN-1, which when mutated leads to Marfan syndrome (OMIM:154700). | Paper_evidence | WBPaper00004637 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable calcium ion binding activity and scavenger receptor activity. Predicted to be involved in endocytosis. Predicted to be located in plasma membrane. Is an ortholog of human MEGF6 (multiple EGF like domains 6). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y64G10A.7a | |||||||
| Y64G10A.7b | |||||||||
| Y64G10A.7c | |||||||||
| Y64G10A.7d | |||||||||
| Y64G10A.7e | |||||||||
| Corresponding_CDS_history | Y64G10A.7:wp190 | ||||||||
| Y64G10A.7:wp201 | |||||||||
| Corresponding_transcript | Y64G10A.7a.1 | ||||||||
| Y64G10A.7b.1 | |||||||||
| Y64G10A.7c.1 | |||||||||
| Y64G10A.7d.1 | |||||||||
| Y64G10A.7e.1 | |||||||||
| Other_sequence (22) | |||||||||
| Associated_feature | WBsf998546 | ||||||||
| WBsf998547 | |||||||||
| WBsf998548 | |||||||||
| WBsf998549 | |||||||||
| WBsf998550 | |||||||||
| WBsf1018634 | |||||||||
| WBsf229498 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057889 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00067226 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022670 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021241 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012182 | ||||||||
| Expr1035991 | |||||||||
| Expr1161323 | |||||||||
| Expr2008153 | |||||||||
| Expr2026393 | |||||||||
| Drives_construct | WBCnstr00029645 | ||||||||
| Construct_product | WBCnstr00029645 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (184) | |||||||||
| Interaction | WBInteraction000006680 | ||||||||
| WBInteraction000040566 | |||||||||
| WBInteraction000515638 | |||||||||
| WBInteraction000560358 | |||||||||
| WBProcess | WBbiopr:00000014 | ||||||||
| Map_info | Positive | Positive_clone | Y64G10A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 11.745 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
