WormBase Tree Display for Gene: WBGene00013348

WBGene00013348 SMap: S_parent: Sequence: Y59A8B
  Identity: Version: 2
    Name: CGC_name: fbxa-106 Person_evidence: WBPerson655
      Sequence_name: Y59A8B.11
      Molecular_name (12)
      Other_name: Y59A8B.u Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_Y59A8B.11 Accession_evidence: NDB BX284605
      Public_name: fbxa-106
    DB_info: Database: AceView gene 5S562
        WormQTL gene WBGene00013348
        WormFlux gene WBGene00013348
        NDB locus_tag CELE_Y59A8B.11
        Panther gene CAEEL|WormBase=WBGene00013348|UniProtKB=L8E967
          family PTHR23015
        NCBI gene 190394
        RefSeq protein NM_075129.5
            NM_001373185.3
            NM_001276994.3
        TrEMBL UniProtAcc Q9NEQ6
            A0A4V0IJX0
            L8E967
        UniProt_GCRP UniProtAcc L8E967
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 12 Dec 2005 15:18:56 WBPerson2970 Name_change: CGC_name: fbxa-106
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (59)
    RNASeq_FPKM (74)
    Ortholog (15)
    Paralog (226)
    Structured_description: Automated_description: Enriched in germ line; germline precursor cell; head mesodermal cell; neurons; and retrovesicular ganglion based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including hsf-1; elt-2; and clk-1 based on microarray and RNA-seq studies. Is affected by nine chemicals including methylmercuric chloride; manganese chloride; and levamisole based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; FTH domain; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y59A8B.11a
      Y59A8B.11b
      Y59A8B.11c
    Corresponding_transcript: Y59A8B.11a.1
      Y59A8B.11a.2
      Y59A8B.11a.3
      Y59A8B.11a.4
      Y59A8B.11b.1
      Y59A8B.11c.1
    Other_sequence: FG647843.1
    Associated_feature: WBsf653525
  Experimental_info: RNAi_result: WBRNAi00013930 Inferred_automatically: RNAi_primary
      WBRNAi00057744 Inferred_automatically: RNAi_primary
      WBRNAi00016802 Inferred_automatically: RNAi_primary
      WBRNAi00037630 Inferred_automatically: RNAi_primary
      WBRNAi00011811 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1013908
      Expr1161167
      Expr2011453
      Expr2029691
    Microarray_results (14)
    Expression_cluster (119)
  Map_info: Map: V Position: 13.9042 Error: 0.066317
    Positive: Positive_clone: Y59A8B Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5668
        5475
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene